Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-331P-201ENST00000384724 107 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AL354751.2-201ENST00000415471 210 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC008155.2-201ENST00000464337 397 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL17P19-201ENST00000489069 552 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AP006245.1-201ENST00000522549 120 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC009318.2-201ENST00000610917 651 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR3651-201ENST00000630427 90 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 Y_RNA.473-201ENST00000384333 102 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 CYCSP48-201ENST00000417124 323 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 BX276092.3-201ENST00000424182 230 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC099799.1-201ENST00000439809 192 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 SNRPGP18-201ENST00000553000 214 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 AP003355.3-201ENST00000623465 114 ntBASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA6Q9Y5G7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORD32A-201ENST00000364805 84 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AP002088.1-201ENST00000382740 395 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 Y_RNA.445-201ENST00000384168 102 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR559-201ENST00000385188 96 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR548P-201ENST00000408336 84 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU2-23P-201ENST00000410545 195 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC096664.2-201ENST00000411843 406 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AL031659.1-201ENST00000447075 539 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 BX510359.1-201ENST00000456973 237 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC022493.2-201ENST00000506122 481 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AL353621.2-201ENST00000605340 133 ntBASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA6Q9Y5G7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 254.3 ms