Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC011816.1-201ENST00000441346 546 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC012308.1-201ENST00000451232 178 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 MTATP8P1-201ENST00000467115 207 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-581P-201ENST00000516214 105 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 RNA5SP384-201ENST00000516615 116 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 SNORD19.2-201ENST00000516978 73 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 SNORA31.18-201ENST00000517043 134 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC004944.1-201ENST00000517807 3059 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC005014.2-201ENST00000607795 599 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC090617.7-201ENST00000623952 126 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 AC138627.2-201ENST00000624202 601 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 MIR3529-201ENST00000637713 78 ntBASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHB1Q9Y5F3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 MIR568-201ENST00000385036 95 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 U3.26-201ENST00000391236 204 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 FTH1P15-201ENST00000406984 280 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC074117.2-201ENST00000417130 397 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 EIF4EP2-201ENST00000422816 654 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 RPS15AP5-201ENST00000436276 388 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AL161651.1-201ENST00000440882 223 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 RPL23AP94-201ENST00000512518 302 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-988P-201ENST00000519081 107 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC023442.1-201ENST00000531247 422 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC009163.5-201ENST00000575421 637 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 RMST_8.1-201ENST00000610287 165 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC010205.1-201ENST00000616668 449 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 AC024581.2-201ENST00000619986 252 ntBASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB1Q9Y5F3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 MCFD2P1-201ENST00000417812 300 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 IPO7P1-201ENST00000442031 636 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 MTND5P22-201ENST00000458380 195 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 RN7SL330P-201ENST00000469709 307 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 HMGN2P13-201ENST00000476476 274 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 RN7SL504P-201ENST00000494496 287 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AC093663.1-201ENST00000497190 394 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 FCF1P8-201ENST00000510322 597 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 MIR4680-201ENST00000580906 66 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 AL353743.1-202ENST00000431724 1695 ntBASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHB1Q9Y5F3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AP000275.1-201ENST00000411943 390 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC023141.4-201ENST00000412031 328 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC096649.2-201ENST00000416186 393 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL035666.1-201ENST00000446195 348 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 MED28P2-201ENST00000475771 317 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC097462.2-201ENST00000504623 481 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC022493.2-201ENST00000506122 481 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 Y_RNA.661-201ENST00000516003 99 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 ACA59.2-201ENST00000517061 156 ntBASIC3.37□□□□□ -1.87
PCDHB1Q9Y5F3 RNU6-711P-201ENST00000517255 106 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms