Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.65□□□□□ -1.83
SF3B6Q9Y3B4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.83
SF3B6Q9Y3B4 IPO8P1-201ENST00000455509 3109 ntBASIC3.65□□□□□ -1.83
SF3B6Q9Y3B4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SF3B6Q9Y3B4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.65□□□□□ -1.83
SF3B6Q9Y3B4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AL133412.1-201ENST00000380194 2992 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AC126755.2-208ENST00000327792 462 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AC138969.1-213ENST00000331436 462 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-19P-201ENST00000384718 107 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 SNORA53-201ENST00000391141 249 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 PTGES3P4-201ENST00000426243 356 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AL136097.1-201ENST00000456945 913 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 RNU7-143P-201ENST00000516781 65 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AK6P2-201ENST00000549020 471 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AC025946.2-201ENST00000603398 234 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 AC004792.1-201ENST00000614523 137 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 uc_338.13-201ENST00000618243 179 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 SNORD98-201ENST00000636377 67 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 ZNF204P-201ENST00000416749 2397 ntBASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
SF3B6Q9Y3B4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.150-201ENST00000363562 102 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 MIR141-201ENST00000384975 95 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 U3.22-201ENST00000391120 215 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 RNA5SP38-201ENST00000410750 119 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 RPL18P10-201ENST00000425606 538 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC112220.1-201ENST00000434628 355 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 RPL23AP52-201ENST00000439311 478 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 HMGB1P37-201ENST00000439613 609 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 PHBP16-201ENST00000446318 950 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC109327.1-201ENST00000471666 403 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 SNORA25.14-201ENST00000516481 132 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 RNA5SP54-201ENST00000516951 92 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 RNU2-31P-201ENST00000516954 155 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC010999.1-201ENST00000611856 324 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC244205.2-202ENST00000635781 342 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 AC007496.3-201ENST00000624987 3443 ntBASIC3.63□□□□□ -1.83
SF3B6Q9Y3B4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC002543.1-201ENST00000299783 1954 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RNU6-326P-201ENST00000365480 107 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RPS26P42-201ENST00000413485 326 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AL591419.1-201ENST00000427423 339 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 OR4C10P-201ENST00000434991 931 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AL500522.2-201ENST00000448562 343 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 RPL23AP3-201ENST00000453844 468 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AIG1P1-201ENST00000503376 148 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC026726.1-201ENST00000512859 601 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC105137.2-201ENST00000569073 466 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 AC068831.7-201ENST00000616954 363 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 FTX_2.1-201ENST00000618816 94 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.62□□□□□ -1.83
SF3B6Q9Y3B4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms