Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HHLA3Q9XRX5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 ZNF72P-201ENST00000425869 1908 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 OR4G2P-201ENST00000328113 903 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNA5SP493-201ENST00000364115 91 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 SNORD114-6-201ENST00000364393 72 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 SNORD26-201ENST00000384147 75 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNU6-83P-201ENST00000384568 112 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNU6-1179P-201ENST00000384667 107 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 BTF3L4P1-201ENST00000413813 468 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC006366.1-201ENST00000422002 759 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 KATNBL1P3-201ENST00000443475 909 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AL360271.2-201ENST00000447710 161 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RN7SKP210-201ENST00000459176 261 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 MTCO3P9-201ENST00000506989 781 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC116347.2-201ENST00000514912 523 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RN7SKP179-201ENST00000516126 217 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNU6-123P-201ENST00000516163 102 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RNU7-51P-201ENST00000516560 62 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 RN7SKP219-201ENST00000516825 296 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC011979.2-201ENST00000527568 352 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 ZNF519P3-201ENST00000557158 1032 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 SUB1P4-201ENST00000566062 339 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 MIR4524B-201ENST00000581569 115 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC092106.3-201ENST00000611308 722 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AL607023.1-201ENST00000620045 248 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC007792.1-201ENST00000623023 402 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC022513.1-201ENST00000624512 117 ntBASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HHLA3Q9XRX5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNU6-23P-201ENST00000363283 107 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 U8.10-201ENST00000384260 133 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNU6-809P-201ENST00000384461 107 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNU6-939P-201ENST00000384634 107 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL669831.1-202ENST00000428504 417 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 CBX3P6-201ENST00000430257 527 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL365400.1-201ENST00000431854 640 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 MTND1P32-201ENST00000433043 938 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 HMGB1P31-201ENST00000437242 427 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 MTND2P4-201ENST00000445034 1004 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC079448.1-201ENST00000449377 373 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL590365.1-201ENST00000450788 243 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL122001.1-201ENST00000457027 370 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNU1-86P-201ENST00000516108 154 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNU1-107P-201ENST00000516617 154 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RNA5SP337-201ENST00000517007 109 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AP003034.1-201ENST00000534621 422 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 SUB1P3-201ENST00000564581 315 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC137800.2-201ENST00000574375 120 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC012409.4-201ENST00000612923 249 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 MIR8074-201ENST00000615081 81 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AL590240.4-201ENST00000616908 390 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 RMST_7.1-201ENST00000621935 268 ntBASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.95□□□□□ -2.26
HHLA3Q9XRX5 AC073343.1-201ENST00000328239 651 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 SNORD56.2-201ENST00000363242 71 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU4-1-201ENST00000363925 141 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU6-660P-201ENST00000364566 109 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU6-39P-201ENST00000384344 107 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU6-160P-201ENST00000384591 107 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU6-482P-201ENST00000391068 107 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 RNU2-41P-201ENST00000410991 178 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 CALM2P2-201ENST00000428512 440 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AL354941.1-201ENST00000438600 464 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC007969.2-201ENST00000441891 191 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AL022238.1-201ENST00000442557 355 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 USP9YP17-201ENST00000444617 696 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC009474.2-201ENST00000451383 136 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AP000797.1-201ENST00000478870 387 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC091951.3-201ENST00000504093 246 ntBASIC0.94□□□□□ -2.26
HHLA3Q9XRX5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms