Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ELOCP7-201ENST00000439968 331 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 SNRPGP12-201ENST00000449481 213 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 OR2AQ1P-201ENST00000451972 200 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 RNU6-889P-201ENST00000517189 103 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AP003392.2-201ENST00000527269 208 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 RPL30P11-203ENST00000598995 310 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AC240442.1-201ENST00000616055 283 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AC119674.1-220ENST00000641502 1048 ntBASIC0.33□□□□□ -2.36
SHANK2Q9UPX8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 RNU6-923P-201ENST00000364753 107 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 RNU6-658P-201ENST00000384606 106 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 MIR604-201ENST00000384880 94 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 C8orf59P1-201ENST00000429930 303 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AL096829.2-201ENST00000446582 742 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 RPL32P14-201ENST00000463196 378 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 MTND1P16-201ENST00000465177 898 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 BET1P1-201ENST00000482276 359 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AP001180.6-201ENST00000584918 159 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 Z82243.1-201ENST00000609432 473 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 AC023934.1-201ENST00000574529 2389 ntBASIC0.32□□□□□ -2.36
SHANK2Q9UPX8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 SNX2P2-201ENST00000424553 323 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AC010153.1-201ENST00000432862 727 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 RSL24D1P8-201ENST00000434442 492 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 GTF2IP13-201ENST00000438487 386 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 RPL30P1-201ENST00000488676 339 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 SNORA70.22-201ENST00000517160 124 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AL512310.8-201ENST00000550183 120 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 MRPS36P5-201ENST00000551909 298 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AP003465.2-201ENST00000602571 373 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 AC138627.2-201ENST00000624202 601 ntBASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.31□□□□□ -2.36
SHANK2Q9UPX8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 RNU6-112P-201ENST00000363599 104 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 CETN4P-201ENST00000432407 469 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 RN7SKP88-201ENST00000516847 250 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 RNU6-528P-201ENST00000516926 100 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 RNU6-703P-201ENST00000516946 107 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 AC004853.1-201ENST00000604902 698 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 7SK.8-201ENST00000612110 250 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 7SK.11-201ENST00000615477 250 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 7SK.13-201ENST00000622040 250 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 AC245060.5-201ENST00000610778 3293 ntBASIC0.3□□□□□ -2.36
SHANK2Q9UPX8 RNU6-743P-201ENST00000364151 106 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 RPS3AP36-201ENST00000398190 775 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 Y_RNA.610-201ENST00000410681 103 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AL451054.2-201ENST00000420896 202 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC008267.5-201ENST00000424928 265 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 MTND1P28-201ENST00000435623 950 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC090142.3-201ENST00000519012 385 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC093249.1-201ENST00000567049 203 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AL118556.2-201ENST00000614375 824 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC092447.10-201ENST00000620607 1652 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 RNU6-23P-201ENST00000363283 107 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 Y_RNA.245-201ENST00000364493 95 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 BTF3L4P3-201ENST00000418879 476 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC019178.2-201ENST00000423595 505 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 TIMM9P1-201ENST00000436122 256 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 COX6CP6-201ENST00000490840 228 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 PDCD5P2-201ENST00000507570 312 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 RNU6-965P-201ENST00000516721 96 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 AC022432.1-201ENST00000595739 310 ntBASIC0.29□□□□□ -2.36
SHANK2Q9UPX8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
SHANK2Q9UPX8 RNU6-657P-201ENST00000383904 107 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 Y_RNA.457-201ENST00000384237 111 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AL121578.1-201ENST00000428051 892 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 MTND2P21-201ENST00000436242 1042 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms