Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 RNU6-56P-201ENST00000516986 93 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC104576.1-201ENST00000524225 88 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC027176.1-201ENST00000560204 514 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC073410.2-201ENST00000603240 332 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 ELOCP5-201ENST00000604924 333 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC005046.1-201ENST00000608515 625 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC025253.1-201ENST00000613623 543 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC009248.2-201ENST00000619826 254 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC097372.5-201ENST00000623665 376 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 AC080128.1-201ENST00000474389 1917 ntBASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PHTF1Q9UMS5 SET-203ENST00000372688 801 ntTSL 2 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 RNU1-57P-201ENST00000384491 166 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 MTCO3P46-201ENST00000425787 232 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC092427.1-202ENST00000430569 476 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 SNAP23P1-201ENST00000433229 246 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AL645568.3-201ENST00000433683 316 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 IFNA20P-201ENST00000436840 528 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 RPS12P18-201ENST00000442381 270 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 UBBP3-201ENST00000445497 241 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC080013.2-201ENST00000460866 323 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC096576.1-201ENST00000489014 359 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC023141.11-201ENST00000508864 202 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC096745.1-201ENST00000509945 370 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC046134.1-201ENST00000514454 666 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 EIF4BP1-201ENST00000554881 351 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 MIR3117-201ENST00000584034 78 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AC023043.2-201ENST00000589678 1026 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AL356280.1-201ENST00000603614 379 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 AL138726.1-201ENST00000614873 333 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.17□□□□□ -1.9
PHTF1Q9UMS5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RNU6-562P-201ENST00000362731 107 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 Y_RNA.212-201ENST00000364177 102 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RNU6-831P-201ENST00000384548 107 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RPL21P111-201ENST00000418453 477 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC243964.1-201ENST00000441814 261 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 MTCO1P29-201ENST00000496868 288 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC092436.3-201ENST00000511788 257 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 RNU4-49P-201ENST00000516080 140 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 Y_RNA.702-201ENST00000516843 96 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC107953.1-201ENST00000522216 297 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC115990.1-201ENST00000526957 301 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 MIR3672-201ENST00000584290 82 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AC064836.2-201ENST00000609491 462 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 uc_338.15-201ENST00000615470 191 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PHTF1Q9UMS5 CBX3P1-201ENST00000325243 554 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RNU1-140P-201ENST00000365040 165 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RNU6-767P-201ENST00000384132 107 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RNU6-933P-201ENST00000384424 107 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 MIR544A-201ENST00000384855 91 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 MIR218-1-201ENST00000384999 110 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 CYCSP48-201ENST00000417124 323 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RPL30P4-201ENST00000429309 333 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RPL32P28-201ENST00000443577 397 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 RPL39P29-201ENST00000447779 157 ntBASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.15□□□□□ -1.91
PHTF1Q9UMS5 MTCO2P30-201ENST00000503662 364 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms