Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC099654.7-201ENST00000635788 2127 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 SNORD62.1-201ENST00000362541 86 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 RNU6-95P-201ENST00000384697 107 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 RN7SKP123-201ENST00000410732 291 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 RNA5SP344-201ENST00000411081 104 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC074085.1-201ENST00000413598 418 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AL139396.1-201ENST00000421137 167 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 HMGN2P30-201ENST00000423237 256 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC107399.1-201ENST00000451226 265 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 SNORA59A-201ENST00000459326 152 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC130509.1-201ENST00000464158 433 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC092436.3-201ENST00000511788 257 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 RN7SKP24-201ENST00000515888 284 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 MIR3609-201ENST00000582661 80 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AL356055.1-201ENST00000602528 446 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AL050343.2-201ENST00000607338 280 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC073308.1-201ENST00000623696 305 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC138627.2-201ENST00000624202 601 ntBASIC2.78□□□□□ -1.96
SIX4Q9UIU6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.78□□□□□ -1.96
SIX4Q9UIU6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-37P-201ENST00000362692 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-11P-201ENST00000364234 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-25P-201ENST00000383873 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-1-201ENST00000383898 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.387-201ENST00000383918 102 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU1-73P-201ENST00000383971 164 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-48P-201ENST00000384161 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-36P-201ENST00000384172 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-4P-201ENST00000384205 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-5P-201ENST00000384238 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-3P-201ENST00000384314 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-16P-201ENST00000384385 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-15P-201ENST00000384534 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-2-201ENST00000384627 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-29P-201ENST00000384637 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-9-201ENST00000384776 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-33P-201ENST00000384793 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 MIR888-201ENST00000401186 77 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AL356057.2-201ENST00000403318 432 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-1304P-201ENST00000411374 106 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPL37P10-201ENST00000412884 288 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPL26P27-201ENST00000414397 437 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 MTND1P14-201ENST00000427400 950 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 SAR1AP4-201ENST00000429225 591 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.635-201ENST00000459041 101 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 snoU109.2-201ENST00000459316 135 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPS27AP10-201ENST00000496103 208 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPS27P27-201ENST00000498779 255 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC079140.5-201ENST00000507882 310 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPL39P5-202ENST00000512505 151 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-559P-201ENST00000516151 98 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-56P-201ENST00000516986 93 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC026371.1-201ENST00000551867 419 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 FRG2DP-202ENST00000566967 323 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC007151.1-201ENST00000572774 483 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 MIR4782-201ENST00000577987 79 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 OR1M4P-201ENST00000589199 287 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RPL23AP78-201ENST00000599928 470 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 RNU6-6P-201ENST00000606623 107 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC064836.2-201ENST00000609491 462 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 AC092608.2-201ENST00000624427 218 ntBASIC2.77□□□□□ -1.97
SIX4Q9UIU6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SIX4Q9UIU6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AL136360.1-201ENST00000503377 1900 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 RNU6-1329P-201ENST00000365664 107 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms