Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU6-945P-201ENST00000383947 107 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-160P-201ENST00000384591 107 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNA5SP503-201ENST00000517047 117 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 MIR3664-201ENST00000579074 99 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-546P-201ENST00000383991 107 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-611P-201ENST00000384276 104 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-167P-201ENST00000384292 106 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RPL22P22-201ENST00000395439 379 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNA5SP266-201ENST00000410273 108 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-667P-201ENST00000517186 102 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 MIR4645-201ENST00000583158 77 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RAC1P9-201ENST00000604990 392 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 AL353765.1-201ENST00000605514 183 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 LARP7P1-201ENST00000605576 316 ntBASIC-0.06□□□□□ -2.42
SCN11AQ9UI33 RNU6-112P-201ENST00000363599 104 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 SNORD99-201ENST00000408612 74 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 RNU2-15P-201ENST00000410692 191 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 AL606662.1-201ENST00000445763 553 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 RPS26P45-201ENST00000471748 340 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 AC093648.1-201ENST00000623546 606 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 U2.21-201ENST00000637295 81 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 AL159152.1-201ENST00000635019 2587 ntBASIC-0.07□□□□□ -2.42
SCN11AQ9UI33 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 AL590556.1-201ENST00000423231 483 ntBASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 AC005951.2-201ENST00000576282 495 ntBASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 AL356157.2-201ENST00000605122 111 ntBASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SCN11AQ9UI33 RNU6-39P-201ENST00000384344 107 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 RPS3AP1-201ENST00000413190 320 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 MIR548AX-201ENST00000580117 73 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AL132822.1-201ENST00000617063 513 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 RNU4-45P-201ENST00000365469 141 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC099677.2-201ENST00000436385 175 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC093027.1-201ENST00000546698 429 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC025627.3-201ENST00000582078 182 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 RNU6-91P-201ENST00000607774 107 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AC135803.1-201ENST00000608748 565 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 AF129408.1-201ENST00000608767 431 ntBASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
SCN11AQ9UI33 MIR649-201ENST00000384843 97 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 SNORD12-201ENST00000391002 90 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 MTND4P20-201ENST00000424125 869 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 RPS15AP9-201ENST00000439856 381 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AL136520.1-202ENST00000555494 763 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 AL360219.1-201ENST00000610230 366 ntBASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
SCN11AQ9UI33 RNU6-514P-201ENST00000384208 107 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC233266.1-201ENST00000454518 96 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AP001324.2-201ENST00000461163 319 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 RNU6-586P-201ENST00000517265 104 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC016256.1-201ENST00000547971 354 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC242852.1-201ENST00000612151 96 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC244015.1-201ENST00000622301 99 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC097372.5-201ENST00000623665 376 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 RNA5SP493-201ENST00000364115 91 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 snoU13.25-201ENST00000458945 104 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms