Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 MIR218-1-201ENST00000384999 110 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AL162578.1-201ENST00000406202 378 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RNU4-26P-201ENST00000410270 107 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC097463.2-201ENST00000421074 142 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 BX276092.3-201ENST00000424182 230 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 SRIP2-201ENST00000428470 166 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AL445687.1-201ENST00000439946 251 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AL031274.1-201ENST00000450334 232 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RNU7-138P-201ENST00000459479 64 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC096576.1-201ENST00000489014 359 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC116353.2-201ENST00000505332 712 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RNU6-377P-201ENST00000515965 102 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 AC121333.1-201ENST00000567488 2709 ntBASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.75□□□□□ -1.97
LIMA1Q9UHB6 RNU6-527P-201ENST00000363425 104 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 RNU6-105P-201ENST00000363909 104 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 MIR128-1-201ENST00000384921 82 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 EIF4E2P1-201ENST00000393781 255 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 SNORA11.1-201ENST00000408133 129 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC138623.1-201ENST00000418060 216 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AL117339.3-201ENST00000418733 162 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 MTATP6P23-201ENST00000440153 476 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 SMURF2P1-201ENST00000514992 481 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 Y_RNA.665-201ENST00000516177 98 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 RNU6-1069P-201ENST00000516612 133 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 COPS8P3-201ENST00000526024 482 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC090897.2-201ENST00000581715 130 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AL121757.2-201ENST00000611223 313 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC002553.4-201ENST00000616896 331 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 AC097372.5-201ENST00000623665 376 ntBASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.74□□□□□ -1.97
LIMA1Q9UHB6 SNORD114-19-201ENST00000363072 75 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 Y_RNA.303-201ENST00000364998 94 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 RNY3P14-201ENST00000384309 102 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 Y_RNA.615-201ENST00000410769 117 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 RPL30P16-201ENST00000419341 429 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AL591043.1-201ENST00000432461 424 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC013470.1-201ENST00000453438 462 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC083904.1-201ENST00000487828 231 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 MIR5692C1-201ENST00000585309 91 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AL357078.3-201ENST00000607528 618 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AL137847.3-201ENST00000611521 109 ntBASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LIMA1Q9UHB6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 RNU6-428P-201ENST00000362942 107 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 Y_RNA.88-201ENST00000363029 99 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 U3.12-201ENST00000364498 214 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 SNORA48.2-201ENST00000390926 124 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 RNA5SP390-201ENST00000410191 113 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 RNU6-373P-201ENST00000411247 98 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC087854.1-201ENST00000519706 414 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 RNU6-323P-201ENST00000521915 107 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC069294.1-201ENST00000608397 350 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC024581.2-201ENST00000619986 252 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 MIR3662-201ENST00000637030 95 ntBASIC2.72□□□□□ -1.97
LIMA1Q9UHB6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 MIR21-201ENST00000362134 72 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms