Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MTND4LP5-201ENST00000605152 292 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 AC090425.1-201ENST00000610007 140 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 AC024581.2-201ENST00000619986 252 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 CR392039.5-201ENST00000623201 510 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 AC241585.2-209ENST00000638217 143 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 AC009541.1-201ENST00000438279 2662 ntBASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
PPARGC1AQ9UBK2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AC233981.2-201ENST00000611524 1614 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-472P-201ENST00000384299 107 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AL358453.1-201ENST00000422522 250 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 USP9YP16-201ENST00000430287 407 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AC125238.1-201ENST00000448842 249 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 USP9YP23-201ENST00000455085 407 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 RPS27AP10-201ENST00000496103 208 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AC023632.4-201ENST00000517783 191 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AL442163.3-201ENST00000554110 156 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 AC012442.3-202ENST00000636742 206 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 Z75746.1-201ENST00000440243 2080 ntBASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PPARGC1AQ9UBK2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 AP000560.1-201ENST00000624150 1937 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.183-201ENST00000363882 113 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-770P-201ENST00000363929 105 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 SNORD115-32-201ENST00000364079 82 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.396-201ENST00000383949 103 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.405-201ENST00000383979 100 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 SNORA5A-201ENST00000384111 134 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.451-201ENST00000384200 100 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.461-201ENST00000384263 103 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.471-201ENST00000384312 102 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.518-201ENST00000384552 113 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.524-201ENST00000384564 100 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.561-201ENST00000384694 100 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 MIR1302-6-201ENST00000408466 90 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 ELOCP20-201ENST00000422460 345 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 MTCO3P29-201ENST00000432119 779 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RPEP5-201ENST00000441137 268 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RPL26P9-201ENST00000457466 433 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 snoU13.30-201ENST00000458951 104 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 ANXA2P1-201ENST00000505539 926 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 AC025465.3-201ENST00000510570 311 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RN7SKP18-201ENST00000516005 275 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 SNORD59.2-201ENST00000516873 68 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-579P-201ENST00000516879 102 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 AC090517.1-201ENST00000569307 266 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 AC130454.1-201ENST00000622948 401 ntBASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PPARGC1AQ9UBK2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC233263.6-201ENST00000631132 1963 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-283P-201ENST00000364788 107 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-968P-201ENST00000384076 107 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RNY3P4-201ENST00000384428 101 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.512-201ENST00000384518 102 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 MIR184-201ENST00000384962 84 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RPL23AP95-201ENST00000426806 265 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC243964.1-201ENST00000441814 261 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AL590664.1-201ENST00000448065 339 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 HMGN2P10-201ENST00000448085 265 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RPS26P21-201ENST00000475397 348 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms