Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RPS15AP10-201ENST00000432472 382 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 MTCO3P43-201ENST00000440974 771 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AL606517.1-201ENST00000446914 387 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RPS27AP8-201ENST00000452665 445 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNU7-59P-201ENST00000459101 61 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 HMGB1P30-201ENST00000492455 606 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC074344.1-201ENST00000512823 224 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNA5SP481-201ENST00000516814 122 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNU6-143P-201ENST00000516942 93 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNA5SP503-201ENST00000517047 117 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNA5SP437-201ENST00000517249 129 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 DEFB108E-201ENST00000524692 240 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 CR383656.8-201ENST00000549046 145 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 HMGB1P33-201ENST00000563485 527 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 MIR4298-201ENST00000584380 73 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC078795.2-201ENST00000602835 1252 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AL356094.1-201ENST00000624663 1212 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNU6-942P-201ENST00000363002 107 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 RNY1P10-201ENST00000363268 113 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 RNU5B-1-201ENST00000363286 116 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 MIR301A-201ENST00000385261 86 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL079342.2-201ENST00000403367 482 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL117342.1-201ENST00000404861 406 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL357139.1-201ENST00000407792 426 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 Y_RNA.597-201ENST00000410463 100 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 RNU6-321P-201ENST00000410912 106 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC016831.2-201ENST00000417179 352 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL591704.1-201ENST00000432574 275 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL158053.1-201ENST00000441503 453 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC097473.1-201ENST00000508142 408 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 RNU6-1225P-201ENST00000516336 65 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 SNORD60.2-201ENST00000516883 86 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC060771.1-201ENST00000582031 164 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AP000654.2-201ENST00000605633 586 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC069545.1-201ENST00000605671 358 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AL365434.2-201ENST00000607979 234 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC040896.1-201ENST00000613819 479 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 AC130324.3-201ENST00000614165 542 ntBASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
COMMD3Q9UBI1 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 SNORD114-24-201ENST00000365029 72 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 Y_RNA.534-201ENST00000384599 112 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 MIR19A-201ENST00000384878 82 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 UBE2V1P15-201ENST00000407776 448 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC114482.1-201ENST00000418010 247 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 MTND1P30-201ENST00000441241 901 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 MTND1P18-201ENST00000448191 573 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC012308.1-201ENST00000451232 178 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 PDCD5P2-201ENST00000507570 312 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC024589.1-201ENST00000512207 263 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 RNU6-1315P-201ENST00000517187 99 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC008015.1-201ENST00000555505 465 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC109446.2-201ENST00000567872 497 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 MTCYBP33-201ENST00000575007 1130 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 BNIP3P31-201ENST00000604515 566 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC016727.1-205ENST00000605437 569 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC023158.2-201ENST00000614876 543 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AL359757.2-201ENST00000624309 274 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 AC068647.2-201ENST00000637380 353 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
COMMD3Q9UBI1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 Y_RNA.338-201ENST00000365320 114 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 MIR605-201ENST00000385078 83 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AL356776.1-201ENST00000406574 447 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 RNA5SP390-201ENST00000410191 113 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 AC010099.3-201ENST00000423896 409 ntBASIC0.44□□□□□ -2.34
COMMD3Q9UBI1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms