Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL159153.1-201ENST00000619688 317 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AC007792.1-201ENST00000623023 402 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL359697.1-201ENST00000624879 587 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LRFN1Q9P244 MTND4P29-201ENST00000503122 1372 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU1-70P-201ENST00000362618 164 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-692P-201ENST00000384496 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-1222P-201ENST00000384615 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-95P-201ENST00000384697 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 MT-TD-201ENST00000387419 68 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-55P-201ENST00000411092 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-954P-201ENST00000411355 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AL139396.1-201ENST00000421137 167 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 AMD1P1-201ENST00000457220 922 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RPS4XP2-201ENST00000458402 793 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC080013.2-201ENST00000460866 323 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC010401.1-201ENST00000463867 348 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC096576.1-201ENST00000489014 359 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 MTCO1P29-201ENST00000496868 288 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNA5SP341-201ENST00000516261 117 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 RNU6-566P-201ENST00000516790 107 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 CPDP1-201ENST00000579660 283 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC090616.3-201ENST00000582184 217 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 MIR3199-1-201ENST00000582434 88 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC073410.2-201ENST00000603240 332 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AL356280.1-201ENST00000603614 379 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 uc_338.5-201ENST00000611839 155 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC009233.1-201ENST00000616477 371 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 AC112487.2-201ENST00000637950 304 ntBASIC2.98□□□□□ -1.93
LRFN1Q9P244 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.98□□□□□ -1.93
LRFN1Q9P244 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LRFN1Q9P244 OR56A5-201ENST00000340110 738 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RNU6-694P-201ENST00000364071 147 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RNU1-140P-201ENST00000365040 165 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RNU1-57P-201ENST00000384491 166 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 MIR544A-201ENST00000384855 91 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRFN1Q9P244 AP000275.1-201ENST00000411943 390 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AL590632.1-201ENST00000424289 371 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 EIF4EP4-201ENST00000424916 578 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC104332.2-201ENST00000429959 156 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 MRPL50P4-201ENST00000446432 475 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RPL39P29-201ENST00000447779 157 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 MTND1P17-201ENST00000448961 204 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 U8.21-201ENST00000459536 136 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC146507.2-201ENST00000460608 476 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RN7SL442P-201ENST00000473804 320 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC103851.1-201ENST00000506833 274 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 SMURF2P1-201ENST00000514992 481 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 RNA5SP454-201ENST00000517231 127 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 AC138761.3-201ENST00000579993 334 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 AP001836.1-201ENST00000604675 523 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 uc_338.15-201ENST00000615470 191 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 MTND4P27-201ENST00000450813 1354 ntBASIC2.97□□□□□ -1.93
LRFN1Q9P244 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
LRFN1Q9P244 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRFN1Q9P244 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RNU1-75P-201ENST00000347264 129 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RNU4-73P-201ENST00000363164 141 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRFN1Q9P244 MIR186-201ENST00000384988 86 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RNU6-325P-201ENST00000411132 105 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 NCOR1P3-201ENST00000420479 303 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPL23AP95-201ENST00000426806 265 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPL23AP22-201ENST00000437556 453 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPS12P18-201ENST00000442381 270 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RNU7-187P-201ENST00000458985 68 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC130509.1-201ENST00000464158 433 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPL9P9-202ENST00000466501 579 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 RPL30P12-201ENST00000474666 353 ntBASIC2.96□□□□□ -1.94
LRFN1Q9P244 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms