Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC002546.1-201ENST00000588041 2504 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 MIR410-201ENST00000362222 80 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 RNU6-20P-201ENST00000384106 107 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 RPL23AP36-201ENST00000413895 458 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 YPEL5P1-201ENST00000419731 367 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 TBCAP1-201ENST00000436520 327 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 TMSB4XP3-201ENST00000445144 114 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC007395.1-201ENST00000451333 677 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 Y_RNA.638-201ENST00000459374 113 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 Y_RNA.662-201ENST00000516028 97 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 SNORD116-28-201ENST00000516123 91 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 SNORA27.4-201ENST00000516650 95 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 AC008749.1-201ENST00000597650 306 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 MZT1P2-201ENST00000604387 248 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 uc_338.32-201ENST00000615087 172 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 U6.106-201ENST00000636360 105 ntBASIC4.36□□□□□ -1.71
CNTN3Q9P232 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTN3Q9P232 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNTN3Q9P232 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTN3Q9P232 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RNA5SP388-201ENST00000362584 119 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 Y_RNA.136-201ENST00000363444 102 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RNU6-884P-201ENST00000363889 107 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RNU1-64P-201ENST00000365443 163 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 HLFP1-201ENST00000402375 499 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 AL591034.1-201ENST00000407447 340 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RN7SL585P-201ENST00000470538 280 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RPS4XP22-201ENST00000480755 780 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RPS26P15-201ENST00000488067 348 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 AC025554.1-201ENST00000505641 188 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RNU6-1278P-201ENST00000516130 107 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 RNA5SP54-201ENST00000516951 92 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 CYCSP23-201ENST00000519781 313 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 AL391261.3-201ENST00000557194 520 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.35□□□□□ -1.71
CNTN3Q9P232 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CNTN3Q9P232 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
CNTN3Q9P232 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTN3Q9P232 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNTN3Q9P232 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTN3Q9P232 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTN3Q9P232 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CNTN3Q9P232 AC092268.1-201ENST00000342691 405 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 RNA5SP197-201ENST00000363357 119 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 RNU1-140P-201ENST00000365040 165 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 RNU6-1175P-201ENST00000365200 107 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 MIR544A-201ENST00000384855 91 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 RNU6-1001P-201ENST00000411265 100 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 RPL19P1-201ENST00000411635 428 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 MTATP6P29-201ENST00000415057 132 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 RN7SL271P-201ENST00000487601 295 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 IGKV2-38-201ENST00000517443 247 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 AC021231.3-201ENST00000558497 370 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 AL606490.9-201ENST00000603331 271 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 AC011921.3-201ENST00000605540 361 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 AC006001.4-201ENST00000622243 395 ntBASIC4.34□□□□□ -1.71
CNTN3Q9P232 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTN3Q9P232 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.34□□□□□ -1.71
CNTN3Q9P232 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CNTN3Q9P232 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.34□□□□□ -1.72
CNTN3Q9P232 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.34□□□□□ -1.72
CNTN3Q9P232 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.34□□□□□ -1.72
CNTN3Q9P232 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.34□□□□□ -1.72
CNTN3Q9P232 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNTN3Q9P232 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.33□□□□□ -1.72
CNTN3Q9P232 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
CNTN3Q9P232 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CNTN3Q9P232 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CNTN3Q9P232 RNY1P5-201ENST00000383890 115 ntBASIC4.33□□□□□ -1.72
CNTN3Q9P232 SNORA1.3-201ENST00000384676 136 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms