Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-377P-201ENST00000515965 102 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 RNA5SP291-201ENST00000517222 105 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC005476.1-201ENST00000554427 397 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AL512605.2-201ENST00000592972 256 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 KLKP1-201ENST00000595979 403 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AP001282.2-201ENST00000616149 309 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 AL356274.2-201ENST00000624379 3752 ntBASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.97□□□□□ -1.77
PDLIM7Q9NR12 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
PDLIM7Q9NR12 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RNU6-200P-201ENST00000364743 107 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RNU6-1062P-201ENST00000383908 107 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.405-201ENST00000383979 100 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.451-201ENST00000384200 100 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.524-201ENST00000384564 100 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.561-201ENST00000384694 100 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 MIR34A-201ENST00000385130 110 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC092798.1-201ENST00000458542 409 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RN7SKP210-201ENST00000459176 261 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 snoU109.2-201ENST00000459316 135 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC010469.2-201ENST00000496412 480 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC093663.1-201ENST00000497190 394 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC067942.3-201ENST00000512025 362 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RN7SKP83-201ENST00000516512 178 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RNU6-572P-201ENST00000516724 80 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 RNA5SP165-201ENST00000517142 115 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC010900.2-201ENST00000604508 210 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC005046.1-201ENST00000608515 625 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AL136164.4-201ENST00000625013 2135 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC243829.7-201ENST00000633081 225 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 OTUD4P1-201ENST00000237841 3067 ntBASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM7Q9NR12 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.20-201ENST00000362479 113 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 RNU1-18P-201ENST00000363062 164 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.123-201ENST00000363338 102 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 RNU6-338P-201ENST00000383888 105 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 MIR493-201ENST00000385254 89 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 SNORA12.2-201ENST00000391040 156 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 MTCYBP2-201ENST00000407745 171 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 U3.39-201ENST00000408569 239 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 MIR548H3-201ENST00000408771 118 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 YPEL5P1-201ENST00000419731 367 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 SDAD1P3-201ENST00000427380 333 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 ANP32BP2-201ENST00000454525 545 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 U3.44-201ENST00000458938 192 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 RNU7-87P-201ENST00000459343 62 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AC091144.1-201ENST00000519573 138 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AP006245.1-201ENST00000522549 120 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 LARP7P3-201ENST00000579888 337 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AC098479.1-201ENST00000609225 154 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AC006386.2-201ENST00000624491 75 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AC012005.1-201ENST00000624575 75 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 FAM35BP-202ENST00000497389 3337 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM7Q9NR12 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RNU6-227P-201ENST00000362865 103 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 Y_RNA.237-201ENST00000364439 102 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 U3.13-201ENST00000364804 214 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RNU1-89P-201ENST00000384592 164 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RPL21P75-201ENST00000396599 483 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RPL21P28-201ENST00000401418 483 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AL590556.1-201ENST00000423231 483 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC096920.1-201ENST00000423991 241 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RPL23AP22-201ENST00000437556 453 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC004383.1-201ENST00000438135 289 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AL078601.1-201ENST00000444542 271 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC009237.8-201ENST00000445492 379 ntBASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM7Q9NR12 RPL21P39-201ENST00000463605 483 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms