Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 AL590240.4-201ENST00000616908 390 ntBASIC0.69□□□□□ -2.3
MRPL40Q9NQ50 AC120349.2-201ENST00000625002 298 ntBASIC0.69□□□□□ -2.3
MRPL40Q9NQ50 RNU6-1210P-201ENST00000363775 107 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 RNU6-343P-201ENST00000364709 104 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 RNU6-1235P-201ENST00000384559 107 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 FTH1P15-201ENST00000406984 280 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 HSPE1P9-201ENST00000440046 311 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 RNU6-333P-201ENST00000459117 107 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 RNU6-498P-201ENST00000459468 107 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC010631.1-201ENST00000474150 156 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 ZNF971P-201ENST00000562068 1249 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC007742.2-201ENST00000618226 398 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC095038.3-201ENST00000634439 195 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 MIR3529-201ENST00000637713 78 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 AC121333.1-201ENST00000567488 2709 ntBASIC0.68□□□□□ -2.3
MRPL40Q9NQ50 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 MIR936-201ENST00000401264 98 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 snoU13.14-201ENST00000459372 104 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 MED28P2-201ENST00000475771 317 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 VN1R83P-201ENST00000595685 445 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 DPPA3P3-201ENST00000603842 430 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 AC018926.1-201ENST00000616335 435 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
MRPL40Q9NQ50 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 RNU6-843P-201ENST00000384454 104 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 MIR520A-201ENST00000384862 85 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 RPL21P111-201ENST00000418453 477 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 MTND4P6-201ENST00000438297 472 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 NEFMP1-201ENST00000443423 1006 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AC023632.1-201ENST00000518463 375 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AC137800.2-201ENST00000574375 120 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 MIR1273G-201ENST00000577677 100 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AC021171.1-201ENST00000603137 706 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 AC112220.2-201ENST00000605513 533 ntBASIC0.66□□□□□ -2.3
MRPL40Q9NQ50 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
MRPL40Q9NQ50 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 RNU6-743P-201ENST00000364151 106 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC009518.2-201ENST00000418056 731 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC027644.1-201ENST00000419595 298 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 MTND2P20-201ENST00000440805 661 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC108729.2-201ENST00000476543 840 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC104629.1-201ENST00000494226 508 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 RNU6-572P-201ENST00000516724 80 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 SNORA76.2-201ENST00000517095 137 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC009902.1-201ENST00000519351 183 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC087854.1-201ENST00000519706 414 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 MIR5094-201ENST00000578766 85 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC008088.1-201ENST00000580993 280 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 AC112191.3-201ENST00000604371 277 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 MIR1248-201ENST00000629190 106 ntBASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
MRPL40Q9NQ50 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 TIMM9P1-201ENST00000436122 256 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 HSPE1P13-201ENST00000451143 297 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 RNA5SP269-201ENST00000459032 137 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 AC067942.3-201ENST00000512025 362 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 RNA5SP481-201ENST00000516814 122 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 AC099654.9-201ENST00000637055 678 ntBASIC0.64□□□□□ -2.31
MRPL40Q9NQ50 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 SNORD114-6-201ENST00000364393 72 ntBASIC0.63□□□□□ -2.31
MRPL40Q9NQ50 MIR625-201ENST00000385047 85 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms