Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
SSU72Q9NP77 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSU72Q9NP77 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSU72Q9NP77 Y_RNA.8-201ENST00000362353 102 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 Y_RNA.308-201ENST00000365043 101 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RNU6-514P-201ENST00000384208 107 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 SPTLC1P2-201ENST00000407089 121 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RN7SKP61-201ENST00000410642 295 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AL451074.5-201ENST00000415894 435 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AL390729.2-201ENST00000416137 156 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 HMGN2P30-201ENST00000423237 256 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 OOSP1P1-201ENST00000423265 274 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RPL23AP1-201ENST00000428990 471 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RPL12P3-201ENST00000440080 396 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 GPM6BP3-201ENST00000442797 145 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AC007395.1-201ENST00000451333 677 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 SNRPGP7-201ENST00000469016 106 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RPS29P20-201ENST00000489592 171 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 RPS27AP10-201ENST00000496103 208 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 IGLVIV-65-201ENST00000517313 360 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 AC090877.1-201ENST00000561418 344 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 AL451007.1-201ENST00000595491 289 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 AC048347.1-201ENST00000624621 427 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 AL109809.4-201ENST00000603520 2185 ntBASIC3.97□□□□□ -1.77
SSU72Q9NP77 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSU72Q9NP77 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SSU72Q9NP77 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SSU72Q9NP77 AL136964.1-201ENST00000622038 2990 ntBASIC3.96□□□□□ -1.77
SSU72Q9NP77 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SSU72Q9NP77 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSU72Q9NP77 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 RNU6-873P-201ENST00000363833 107 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 MIR888-201ENST00000401186 77 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC138623.1-201ENST00000418060 216 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AL732292.1-201ENST00000426692 226 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 POLR2KP2-201ENST00000438155 177 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 RN7SL354P-201ENST00000469282 294 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 RN7SL177P-201ENST00000476596 299 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 RN7SL481P-201ENST00000477764 299 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC074133.1-201ENST00000515696 183 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC233702.2-202ENST00000562547 291 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC005176.2-201ENST00000596933 147 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 MIR7155-201ENST00000615925 56 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 AC006001.4-201ENST00000622243 395 ntBASIC3.96□□□□□ -1.78
SSU72Q9NP77 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSU72Q9NP77 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSU72Q9NP77 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SSU72Q9NP77 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSU72Q9NP77 Y_RNA.441-201ENST00000384123 112 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 SNORA46.1-201ENST00000391069 153 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 BX510359.3-201ENST00000422168 306 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AP000873.1-201ENST00000463987 400 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 RN7SL329P-201ENST00000467740 299 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AL512624.1-201ENST00000613638 469 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC018445.2-201ENST00000622987 260 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC112200.1-201ENST00000625015 234 ntBASIC3.95□□□□□ -1.78
SSU72Q9NP77 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.95□□□□□ -1.78
SSU72Q9NP77 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SSU72Q9NP77 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSU72Q9NP77 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU6-653P-201ENST00000363074 106 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 Y_RNA.101-201ENST00000363154 102 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU6-1285P-201ENST00000363480 105 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU6-270P-201ENST00000364131 105 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 SNORA26.3-201ENST00000391119 136 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms