Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
TM9SF3Q9HD45 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 SNORD115-3-201ENST00000363100 82 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 RNU6-843P-201ENST00000384454 104 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 MIR558-201ENST00000384920 94 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC008267.5-201ENST00000424928 265 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC092447.3-201ENST00000426027 686 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 MTATP6P16-201ENST00000434543 526 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AL031667.1-201ENST00000440222 725 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 BET1P1-201ENST00000482276 359 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC092325.1-201ENST00000566449 554 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC093249.1-201ENST00000567049 203 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 BNIP3P30-201ENST00000601184 574 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AL078605.1-201ENST00000603529 500 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 SEPT7P9-203ENST00000604116 343 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC090578.1-201ENST00000604955 591 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 AC099842.1-201ENST00000619919 596 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TM9SF3Q9HD45 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC073343.1-201ENST00000328239 651 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RNU6-529P-201ENST00000363383 104 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RNU6-487P-201ENST00000365430 104 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RNY3P10-201ENST00000384764 102 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RNU2-39P-201ENST00000410604 198 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RPS6P15-201ENST00000431996 751 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC000111.3-201ENST00000433478 193 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AL451074.3-201ENST00000437709 472 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RN7SKP210-201ENST00000459176 261 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 MTCO2P29-201ENST00000465212 189 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC137800.2-201ENST00000574375 120 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 MIR3913-1-201ENST00000577744 102 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 AC093648.1-201ENST00000623546 606 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
TM9SF3Q9HD45 RNU6-61P-201ENST00000365528 109 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 RNU6-546P-201ENST00000383991 107 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 MIR578-201ENST00000384828 96 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 RNU2-32P-201ENST00000411193 191 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 BX295541.1-201ENST00000417774 250 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC137499.1-201ENST00000427602 88 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC009961.2-201ENST00000435771 251 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 RNA5SP57-201ENST00000459463 123 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 HMGB1P30-201ENST00000492455 606 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC098862.1-201ENST00000504991 413 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC112206.3-201ENST00000514578 389 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC026407.1-201ENST00000518369 204 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AC091834.1-201ENST00000614543 472 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AL359740.1-201ENST00000624340 592 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 AL157786.1-207ENST00000627771 695 ntBASIC1.88□□□□□ -2.11
TM9SF3Q9HD45 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AF228730.1-201ENST00000397972 663 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms