Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SKA2P1-201ENST00000425592 390 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 IFNA20P-201ENST00000436840 528 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 RNU7-23P-201ENST00000459465 62 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC090255.1-201ENST00000495779 349 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 GZMAP1-201ENST00000503054 631 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC234781.5-201ENST00000508429 271 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 LRRC34P2-201ENST00000514850 553 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 RNU6-189P-201ENST00000516120 101 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 RNU6-1069P-201ENST00000516612 133 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC026464.5-201ENST00000562497 722 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 MIR548AC-201ENST00000585049 88 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC002044.1-201ENST00000606707 158 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 AC112487.2-201ENST00000637950 304 ntBASIC2.76□□□□□ -1.97
UPF2Q9HAU5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPF2Q9HAU5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-1252P-201ENST00000363054 104 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-254P-201ENST00000363377 107 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 Z98749.2-208ENST00000381646 500 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.414-201ENST00000384011 101 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-434P-201ENST00000384376 107 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-140P-201ENST00000384566 108 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.529-201ENST00000384586 119 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-1025P-201ENST00000410629 104 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 MTND3P8-201ENST00000412909 339 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AL513477.1-202ENST00000417061 214 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 WARS2P1-201ENST00000429678 537 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 SNRPEP9-201ENST00000436794 238 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RPL7P12-201ENST00000446719 750 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC103851.1-201ENST00000506833 274 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 HMGB3P3-201ENST00000510526 400 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC104136.1-201ENST00000512969 394 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU6-864P-201ENST00000516256 108 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 RNU7-30P-201ENST00000516835 62 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC025755.1-201ENST00000521306 278 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.75□□□□□ -1.97
UPF2Q9HAU5 FGF7P1-201ENST00000582820 288 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 MIR3672-201ENST00000584290 82 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 MIR5692C1-201ENST00000585309 91 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 AL357078.3-201ENST00000607528 618 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 FTX_3.1-201ENST00000610451 147 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.75□□□□□ -1.97
UPF2Q9HAU5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.33-201ENST00000362591 102 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.100-201ENST00000363141 102 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU6-778P-201ENST00000363269 103 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.263-201ENST00000364659 114 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU6-166P-201ENST00000384371 107 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.509-201ENST00000384506 99 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AL714022.1-201ENST00000439897 151 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AC008716.1-201ENST00000511084 513 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AC008549.1-201ENST00000512900 643 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 SNORA14.1-201ENST00000516113 141 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU6-277P-201ENST00000516272 106 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU1-103P-201ENST00000516502 125 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU6-703P-201ENST00000516946 107 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RNU1-104P-201ENST00000517280 175 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RPS3AP23-202ENST00000574601 686 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF2Q9HAU5 RMST_4.1-201ENST00000616886 107 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 UCA1.1-201ENST00000620952 75 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 AL359697.1-201ENST00000624879 587 ntBASIC2.74□□□□□ -1.97
UPF2Q9HAU5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.142-201ENST00000363491 102 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 RNU6-266P-201ENST00000364225 107 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 SNORD14B-201ENST00000364533 90 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 Y_RNA.474-201ENST00000384341 102 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 MIR634-201ENST00000385208 97 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UPF2Q9HAU5 RNU6-1009P-201ENST00000390996 107 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 SNORA40C-201ENST00000391285 128 ntBASIC2.73□□□□□ -1.97
UPF2Q9HAU5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms