Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MTCO3P5-201ENST00000433620 714 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 MTND3P25-201ENST00000509243 135 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AP004607.1-201ENST00000524456 203 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AC007834.2-201ENST00000536310 343 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AL121917.1-203ENST00000605534 577 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 AC084768.2-201ENST00000622736 221 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 MTND5P17-201ENST00000418405 1603 ntBASIC2.16□□□□□ -2.06
RPAP3Q9H6T3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 RNU6-74P-201ENST00000384235 107 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 SNORD116-20-201ENST00000384529 92 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 RNU2-63P-201ENST00000410792 194 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 DNAJC19P4-201ENST00000440115 345 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AL031667.1-201ENST00000440222 725 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC079781.2-201ENST00000446424 169 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC012308.1-201ENST00000451232 178 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 HMGB3P17-201ENST00000504195 649 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AP003072.2-201ENST00000527756 676 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 OSBPL9P5-201ENST00000542581 171 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC040904.1-201ENST00000590850 223 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 BNIP3P30-201ENST00000601184 574 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 MIR8081-201ENST00000611533 95 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AC011155.2-201ENST00000623202 216 ntBASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.15□□□□□ -2.07
RPAP3Q9H6T3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 RNA5SP190-201ENST00000365222 118 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 RNU6-843P-201ENST00000384454 104 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AL627390.1-201ENST00000396055 340 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AF228730.1-201ENST00000397972 663 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 RN7SKP142-201ENST00000411236 328 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 UBE2V1P10-201ENST00000414685 269 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC244505.5-201ENST00000443639 207 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 RN7SKP210-201ENST00000459176 261 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 SNORD13-201ENST00000459299 104 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 HMGB1P30-201ENST00000492455 606 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC026407.1-201ENST00000518369 204 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC136619.2-201ENST00000563361 631 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC073539.2-201ENST00000597113 165 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC245014.2-201ENST00000603689 287 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC121247.2-201ENST00000604776 136 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 AC246785.4-201ENST00000605374 287 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 NDUFA8P1-201ENST00000605525 367 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 MIR5739-201ENST00000619803 80 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 U6.114-201ENST00000636407 96 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 MIR3529-201ENST00000637713 78 ntBASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RPAP3Q9H6T3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 SNORD114-19-201ENST00000363072 75 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 RNU6-108P-201ENST00000365558 107 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 OR6C66P-201ENST00000414917 930 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 EDDM3CP-201ENST00000415977 425 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 AL358934.1-201ENST00000432346 324 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 RPS29P15-201ENST00000458329 171 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 MTCO3P28-201ENST00000513351 515 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
RPAP3Q9H6T3 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms