Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 Y_RNA.3-201ENST00000362331 103 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 RNA5SP181-201ENST00000410246 98 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AL031274.1-201ENST00000450334 232 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 TPTE2P5-203ENST00000458118 728 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 RPL30P12-201ENST00000474666 353 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 RN7SKP24-201ENST00000515888 284 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 RNU6-720P-201ENST00000516363 108 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC016957.1-201ENST00000534895 309 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AL512310.1-201ENST00000548639 172 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC090897.2-201ENST00000581715 130 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 MIR3941-201ENST00000582572 103 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 APOOP1-201ENST00000604695 592 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 FO624990.1-201ENST00000636373 85 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 U4.7-201ENST00000638126 106 ntBASIC2.3□□□□□ -2.04
UBQLN3Q9H347 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.3□□□□□ -2.04
UBQLN3Q9H347 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU6-212P-201ENST00000362642 104 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU6-487P-201ENST00000365430 104 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU6-622P-201ENST00000384272 103 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU1-57P-201ENST00000384491 166 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 SNORD56-201ENST00000413522 71 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AC009963.1-201ENST00000417265 157 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNA5SP402-201ENST00000517148 110 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 MIR4446-201ENST00000578505 67 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AL138963.2-201ENST00000605137 226 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 RNU6-85P-201ENST00000605989 107 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 uc_338.15-201ENST00000615470 191 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 AC139792.2-201ENST00000624218 587 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBQLN3Q9H347 Z82209.1-201ENST00000422141 2135 ntBASIC2.29□□□□□ -2.04
UBQLN3Q9H347 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-1010P-201ENST00000362757 107 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-529P-201ENST00000363383 104 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 U8.8-201ENST00000365399 135 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 XGY1-201ENST00000381172 446 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-38P-201ENST00000384085 107 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 MIR186-201ENST00000384988 86 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AL162578.1-201ENST00000406202 378 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNA5SP390-201ENST00000410191 113 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RN7SKP158-201ENST00000410453 326 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-1068P-201ENST00000410958 103 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-1245P-201ENST00000411130 106 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 SEPT14P3-201ENST00000439401 183 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AL732372.2-207ENST00000445840 183 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 SEPT14P2-201ENST00000453405 183 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-333P-201ENST00000459117 107 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RPL21P99-201ENST00000480369 423 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AF213884.2-201ENST00000510417 903 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 SEPT14P4-201ENST00000513445 186 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RNU6-189P-201ENST00000516120 101 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 SNORA31.11-201ENST00000516528 139 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 FO082796.1-201ENST00000523795 183 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AK6P1-201ENST00000540219 478 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC090115.3-201ENST00000553218 849 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 OR11H5P-201ENST00000554039 926 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 PSMA3P-201ENST00000555485 635 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC027176.1-201ENST00000560204 514 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 VN1R80P-201ENST00000597126 338 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 RPL30P11-203ENST00000598995 310 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AL162413.1-201ENST00000603198 110 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 AC092747.3-201ENST00000603769 301 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UBQLN3Q9H347 MIR5739-201ENST00000619803 80 ntBASIC2.28□□□□□ -2.04
UBQLN3Q9H347 YWHAEP7-203ENST00000622054 312 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms