Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNA5SP295-201ENST00000362655 121 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 SNORA70.4-201ENST00000365509 134 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AL627311.1-201ENST00000431514 115 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AL591043.1-201ENST00000432461 424 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC104332.1-201ENST00000440471 797 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 RN7SKP210-201ENST00000459176 261 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 RPS29P27-201ENST00000463711 170 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 TOMM22P6-201ENST00000465035 409 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 RPL30P14-201ENST00000482744 348 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC006445.2-201ENST00000510061 472 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 SNORA31.6-201ENST00000516241 130 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 RNU4-71P-201ENST00000516258 113 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.706-201ENST00000516933 99 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 SNORA31.19-201ENST00000517079 126 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 RNA5SP165-201ENST00000517142 115 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC073657.2-201ENST00000605661 303 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC011476.5-201ENST00000615594 130 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC068831.7-201ENST00000616954 363 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AL359693.1-201ENST00000614959 2407 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 AC022336.2-201ENST00000568966 2538 ntBASIC3.86□□□□□ -1.79
RNF38Q9H0F5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
RNF38Q9H0F5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 SNORA63.1-201ENST00000362493 131 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RNU6-217P-201ENST00000384164 104 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.541-201ENST00000384640 113 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 MIR7-3-201ENST00000384898 110 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RNU2-68P-201ENST00000410878 191 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RPS29P4-201ENST00000414733 161 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 SNRPEP9-201ENST00000436794 238 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 snoU109.2-201ENST00000459316 135 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RN7SKP18-201ENST00000516005 275 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RN7SKP272-201ENST00000516988 232 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 AC008011.1-201ENST00000545989 227 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 AC023824.2-201ENST00000566185 400 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 AC243829.7-201ENST00000633081 225 ntBASIC3.85□□□□□ -1.79
RNF38Q9H0F5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF38Q9H0F5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 LINC02555-201ENST00000563933 1951 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 FTLP6-201ENST00000355274 422 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 Y_RNA.200-201ENST00000364018 102 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 RNU6-886P-201ENST00000384319 105 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AL079342.1-201ENST00000401460 267 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 MRPL35P1-201ENST00000404272 572 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AL159169.1-201ENST00000421119 127 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 RNU7-170P-201ENST00000459303 61 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 MED28P2-201ENST00000475771 317 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 RPL21P13-201ENST00000488305 481 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 TRBV12-2-201ENST00000489763 344 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AC005476.1-201ENST00000554427 397 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 MIR3609-201ENST00000582661 80 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 BX284668.6-201ENST00000606899 438 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
RNF38Q9H0F5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RNF38Q9H0F5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RNF38Q9H0F5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
RNF38Q9H0F5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RNF38Q9H0F5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF38Q9H0F5 RNU6-227P-201ENST00000362865 103 ntBASIC3.83□□□□□ -1.8
RNF38Q9H0F5 SNORD81.1-201ENST00000363064 77 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms