Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
BHLHE41Q9C0J9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 RAD17P1-201ENST00000418130 2042 ntBASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
BHLHE41Q9C0J9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 RPL21P126-201ENST00000470049 478 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 RNA5SP154-201ENST00000516193 111 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-191P-201ENST00000516295 94 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 TOMM20P2-201ENST00000540082 421 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 PARP1P2-201ENST00000556806 195 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 MIR5096-201ENST00000583713 70 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AL162713.1-201ENST00000604480 262 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AC004825.2-201ENST00000616634 455 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AL365265.1-201ENST00000621045 234 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AC010300.1-201ENST00000600671 5134 ntBASIC4.08□□□□□ -1.76
BHLHE41Q9C0J9 AC002543.1-201ENST00000299783 1954 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 Y_RNA.101-201ENST00000363154 102 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-245P-201ENST00000384020 107 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-211P-201ENST00000384047 107 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-1310P-201ENST00000384153 107 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-622P-201ENST00000384272 103 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 MIR549A-201ENST00000385268 96 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 MIR208B-201ENST00000401172 77 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AL357139.1-201ENST00000407792 426 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 SNORA11F-201ENST00000408237 128 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RN7SKP177-201ENST00000410567 355 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 ELOCP19-201ENST00000411919 318 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AL451074.5-201ENST00000415894 435 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AL645939.1-201ENST00000453429 797 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 S100A11P1-201ENST00000477525 312 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC025445.1-201ENST00000502728 300 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC006445.2-201ENST00000510061 472 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RNU2-58P-201ENST00000516403 183 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC024220.1-201ENST00000603675 484 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC108706.1-201ENST00000611053 297 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 MIR6758-201ENST00000620653 63 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 AC091932.3-201ENST00000624223 323 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 snoU18.1-201ENST00000629629 71 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 SNORD98-201ENST00000636377 67 ntBASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
BHLHE41Q9C0J9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 CUL1P1-201ENST00000509510 2425 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AC004944.1-201ENST00000517807 3059 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AC068254.2-201ENST00000623938 3577 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-727P-201ENST00000363592 107 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 SNORA70.2-201ENST00000364506 135 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 RNU6-1135P-201ENST00000411083 103 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AL160275.2-201ENST00000412010 394 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AL356387.2-201ENST00000422272 243 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 IFNA11P-201ENST00000446352 526 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 RNA5SP310-201ENST00000459084 116 ntBASIC4.06□□□□□ -1.76
BHLHE41Q9C0J9 AC007215.1-201ENST00000464893 276 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms