Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 Y_RNA.328-201ENST00000365208 113 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 SNORD78.1-201ENST00000390866 65 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 U6atac.2-201ENST00000408644 118 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 U3.40-201ENST00000408706 208 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 AC009237.8-201ENST00000445492 379 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 RN7SKP12-201ENST00000516275 143 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 SNORA31.8-201ENST00000516327 108 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 RNA5SP392-201ENST00000516905 112 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 RNU2-12P-201ENST00000517216 168 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 AC090142.3-201ENST00000519012 385 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 AP004607.1-201ENST00000524456 203 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 MIR5571-201ENST00000577998 113 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 SNORA51-201ENST00000606420 132 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 U6.99-201ENST00000637524 83 ntBASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3Q9BZ76 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 U8.1-201ENST00000362843 134 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 Y_RNA.229-201ENST00000364347 113 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6-142P-201ENST00000384019 107 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6-1152P-201ENST00000384576 107 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 SNORA77-201ENST00000408716 125 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC096649.2-201ENST00000416186 393 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC011998.1-201ENST00000433403 117 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 SNRPEP9-201ENST00000436794 238 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 RPS29P9-201ENST00000440360 171 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 HMGN2P32-201ENST00000444648 269 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 RNU5F-2P-201ENST00000516066 82 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 SNORA70.16-201ENST00000516390 95 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 SCARNA20.4-201ENST00000516969 131 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC022726.1-201ENST00000587475 207 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 AC120024.3-201ENST00000603167 156 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 MIR3674-201ENST00000636576 68 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.51□□□□□ -1.69
CNTNAP3Q9BZ76 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 AC118273.1-201ENST00000525324 3006 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 RNA5SP432-201ENST00000362480 116 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6-527P-201ENST00000363425 104 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 U3.37-201ENST00000408528 213 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 RPS26P45-201ENST00000471748 340 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6-781P-201ENST00000516377 101 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 AC244107.2-201ENST00000611773 76 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 AC019206.1-201ENST00000621938 425 ntBASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP3Q9BZ76 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 Y_RNA.120-201ENST00000363304 110 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 Y_RNA.219-201ENST00000364232 113 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 Y_RNA.281-201ENST00000364774 94 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 Y_RNA.500-201ENST00000384466 111 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 RNU6-1245P-201ENST00000411130 106 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AC104333.2-201ENST00000422630 192 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AL162151.2-201ENST00000448875 158 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 RPL23AP70-201ENST00000483361 460 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 RNA5SP54-201ENST00000516951 92 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AC018630.3-201ENST00000542637 96 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 RN7SL703P-201ENST00000578485 302 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AC091178.2-201ENST00000584401 117 ntBASIC4.49□□□□□ -1.69
CNTNAP3Q9BZ76 AC136601.2-201ENST00000604356 474 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms