Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC138623.1-201ENST00000418060 216 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 snoU13.30-201ENST00000458951 104 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC021146.2-201ENST00000504736 556 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 RAC1P5-201ENST00000512182 576 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC144568.1-201ENST00000520139 137 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 RPL23AP78-201ENST00000599928 470 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC136443.5-201ENST00000603741 370 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC100812.1-201ENST00000607622 580 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL359198.2-201ENST00000611836 194 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL159153.1-201ENST00000619688 317 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL354798.1-201ENST00000622505 329 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AL450472.1-202ENST00000637286 180 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC091812.1-201ENST00000432235 1948 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM55Q9BYV6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AP000560.1-201ENST00000624150 1937 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNU6-1010P-201ENST00000362757 107 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNA5SP139-201ENST00000364340 117 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 SNORA36A-201ENST00000384221 132 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.527-201ENST00000384573 102 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 SNORA26.3-201ENST00000391119 136 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNU6-985P-201ENST00000410182 104 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 SNORA57.3-201ENST00000411095 141 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 YME1L1P1-201ENST00000429435 297 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC009296.1-201ENST00000443146 155 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC112492.4-201ENST00000456549 352 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNU7-170P-201ENST00000459303 61 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 RNU7-169P-201ENST00000459456 61 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.706-201ENST00000516933 99 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 MIR4738-201ENST00000579134 87 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC008739.3-201ENST00000603262 127 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AL137849.1-201ENST00000604767 169 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 uc_338.14-201ENST00000613162 166 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AL138825.1-201ENST00000618587 192 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AL162373.1-201ENST00000620433 407 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AL353743.1-202ENST00000431724 1695 ntBASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM55Q9BYV6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 RNU6-212P-201ENST00000362642 104 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 SNORD114-19-201ENST00000363072 75 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 SNORD46.1-201ENST00000364139 104 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 U3.13-201ENST00000364804 214 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 SNORA73.2-201ENST00000364946 201 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 RNU6-213P-201ENST00000384051 104 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 SNORA69.1-201ENST00000390904 137 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC093578.1-201ENST00000415219 368 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 CYCSP48-201ENST00000417124 323 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 RPL21P40-201ENST00000428586 483 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 TOMM22P6-201ENST00000465035 409 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC087477.1-201ENST00000465747 340 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC006445.1-201ENST00000491925 405 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC015911.1-201ENST00000495111 156 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC115990.1-201ENST00000526957 301 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 HSBP1P1-201ENST00000555205 166 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC021231.3-201ENST00000558497 370 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC006600.1-201ENST00000572529 153 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC104695.3-201ENST00000604052 296 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 UCA1.1-201ENST00000620952 75 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 ZNF72P-201ENST00000425869 1908 ntBASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM55Q9BYV6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 SNORD115-32-201ENST00000364079 82 ntBASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.78□□□□□ -1.8
TRIM55Q9BYV6 MIR184-201ENST00000384962 84 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms