Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AL391813.1-201ENST00000603098 260 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 MTND5P1-201ENST00000445440 1375 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 SNORD46.1-201ENST00000364139 104 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6-1040P-201ENST00000383974 107 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6-692P-201ENST00000384496 107 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6-331P-201ENST00000384724 107 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 EIF4EP2-201ENST00000422816 654 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC007969.2-201ENST00000441891 191 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC115115.1-201ENST00000449927 248 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC091179.1-201ENST00000461606 579 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC110794.1-201ENST00000505816 425 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNA5SP384-201ENST00000516615 116 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6-264P-201ENST00000517134 104 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL442663.2-201ENST00000554385 511 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AL080274.1-201ENST00000605565 220 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 AC009541.1-201ENST00000438279 2662 ntBASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM54Q9BYV2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 MIR369-201ENST00000362155 70 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.123-201ENST00000363338 102 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RNU6-1227P-201ENST00000383981 107 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 MIR544A-201ENST00000384855 91 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RNA5SP390-201ENST00000410191 113 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC005534.2-201ENST00000431047 433 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.639-201ENST00000458981 102 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RPS29P27-201ENST00000463711 170 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 FO393415.2-201ENST00000480085 343 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AL356157.2-201ENST00000605122 111 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AL353621.2-201ENST00000605340 133 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
TRIM54Q9BYV2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 MTND5P9-201ENST00000503854 1755 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 SNORA63-201ENST00000363450 132 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.197-201ENST00000364004 102 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 SNORD42.2-201ENST00000365570 69 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.445-201ENST00000384168 102 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 SNORA41-201ENST00000384675 132 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 BX276092.3-201ENST00000424182 230 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 MIR2053-201ENST00000459295 91 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC105137.2-201ENST00000569073 466 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC090897.2-201ENST00000581715 130 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC096772.1-201ENST00000609146 564 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms