Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC008628.1-201ENST00000508663 265 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC093519.1-201ENST00000566109 298 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC093249.1-201ENST00000567049 203 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 MIR3664-201ENST00000579074 99 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 BNIP3P24-201ENST00000593398 557 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC022432.1-201ENST00000595739 310 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC098614.4-201ENST00000607601 462 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AL133445.2-201ENST00000611191 527 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AL118556.2-201ENST00000614375 824 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC009509.4-201ENST00000619202 509 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 RNA5SP361-201ENST00000362686 118 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 SNORD116-23-201ENST00000384645 92 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SCAPERQ9BY12 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.27□□□□□ -2.37
SCAPERQ9BY12 MTND3P4-201ENST00000453537 303 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 RNA5SP269-201ENST00000459032 137 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC010460.2-201ENST00000509054 677 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 MTCYBP40-201ENST00000509390 1135 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC093259.1-201ENST00000509755 300 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 RNA5SP503-201ENST00000517047 117 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.27□□□□□ -2.37
SCAPERQ9BY12 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC105129.3-201ENST00000605455 485 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC112220.2-201ENST00000605513 533 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC107952.2-201ENST00000606048 486 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC104465.1-201ENST00000611365 139 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 AC130454.1-201ENST00000622948 401 ntBASIC0.27□□□□□ -2.37
SCAPERQ9BY12 MIR605-201ENST00000385078 83 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 MIR16-1-201ENST00000385271 89 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 RPS3AP37-201ENST00000419176 745 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC093422.3-201ENST00000428506 305 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 MTND2P4-201ENST00000445034 1004 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC090502.2-201ENST00000549267 280 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC018659.1-201ENST00000551083 169 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 AC012065.4-201ENST00000602445 679 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
SCAPERQ9BY12 RPS3AP1-201ENST00000413190 320 ntBASIC0.25□□□□□ -2.37
SCAPERQ9BY12 RPL23AP95-201ENST00000426806 265 ntBASIC0.25□□□□□ -2.37
SCAPERQ9BY12 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.25□□□□□ -2.37
SCAPERQ9BY12 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.25□□□□□ -2.37
SCAPERQ9BY12 AC048346.1-201ENST00000510247 144 ntBASIC0.25□□□□□ -2.37
SCAPERQ9BY12 SNORA3.4-201ENST00000515969 96 ntBASIC0.25□□□□□ -2.37
SCAPERQ9BY12 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.25□□□□□ -2.37
SCAPERQ9BY12 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.25□□□□□ -2.37
SCAPERQ9BY12 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.25□□□□□ -2.37
SCAPERQ9BY12 AC091057.3-201ENST00000602684 733 ntBASIC0.25□□□□□ -2.37
SCAPERQ9BY12 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RNU6-1274P-201ENST00000384557 107 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 MIR200A-201ENST00000384875 90 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 TMSB4XP8-201ENST00000402089 135 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RNU2-7P-201ENST00000410794 178 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 UBE2V1P11-201ENST00000411559 285 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 TMSB4XP6-201ENST00000415187 135 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RPL21P111-201ENST00000418453 477 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 TMSB4XP1-201ENST00000424567 135 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC092170.1-201ENST00000440211 356 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC118282.2-201ENST00000508739 374 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RNU2-53P-201ENST00000516257 147 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC136619.2-201ENST00000563361 631 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AC090578.1-201ENST00000604955 591 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 AL365434.2-201ENST00000607979 234 ntBASIC0.24□□□□□ -2.37
SCAPERQ9BY12 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 BTF3L4P3-201ENST00000418879 476 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 CETN4P-201ENST00000432407 469 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC010153.1-201ENST00000432862 727 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 MTND5P14-201ENST00000441481 1267 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 RNA5SP168-201ENST00000516642 112 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC025423.5-201ENST00000550230 219 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC009237.15-201ENST00000610252 501 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC096586.1-201ENST00000610267 561 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 MIR6134-201ENST00000617606 109 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC093648.1-201ENST00000623546 606 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.23□□□□□ -2.37
SCAPERQ9BY12 AC068647.2-201ENST00000637380 353 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 FARSBP1-201ENST00000435808 1778 ntBASIC0.23□□□□□ -2.37
SCAPERQ9BY12 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms