Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 H3F3AP1-201ENST00000559984 334 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 FTX_3.1-201ENST00000610451 147 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 AC112200.1-201ENST00000625015 234 ntBASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZKSCAN3Q9BRR0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AC006504.1-201ENST00000562493 3666 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-898P-201ENST00000365627 104 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-217P-201ENST00000384164 104 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-21P-201ENST00000384710 107 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 Y_RNA.626-201ENST00000411288 95 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL26P27-201ENST00000414397 437 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL37P4-201ENST00000448908 268 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL23AP14-201ENST00000468281 468 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 VWA8P1-201ENST00000510889 176 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNA5SP164-201ENST00000516533 110 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RN7SKP49-201ENST00000516675 260 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-1282P-201ENST00000516735 96 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AC087441.2-201ENST00000529141 262 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 MIR5187-201ENST00000583479 76 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 U2.21-201ENST00000637295 81 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AC022336.2-201ENST00000568966 2538 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 AC018555.1-201ENST00000567548 1980 ntBASIC4.38□□□□□ -1.71
ZKSCAN3Q9BRR0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 SRP72P2-201ENST00000344851 1979 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-682P-201ENST00000363843 106 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 RNA5SP51-201ENST00000364750 119 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORA73.2-201ENST00000364946 201 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 RNY4P28-201ENST00000365281 93 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORA29-201ENST00000384183 140 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 Y_RNA.569-201ENST00000384749 103 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 MTCO2P33-201ENST00000402100 465 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 COX6CP10-201ENST00000416832 224 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 AL035423.1-201ENST00000420331 213 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 HMGN2P30-201ENST00000423237 256 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 RPL23AP95-201ENST00000426806 265 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 AC098831.1-201ENST00000440661 216 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 AC073901.1-201ENST00000462471 408 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 MRPL42P6-201ENST00000486397 371 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 AC091874.1-201ENST00000511402 339 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 MIR4423-201ENST00000580922 80 ntBASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZKSCAN3Q9BRR0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORA25.1-201ENST00000362326 128 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNA5SP361-201ENST00000362686 118 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-778P-201ENST00000363269 103 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-137P-201ENST00000363680 108 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-740P-201ENST00000364734 105 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORD32A-201ENST00000364805 84 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU6-125P-201ENST00000384505 107 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNA5SP424-201ENST00000390988 115 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU4-30P-201ENST00000410245 143 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AL390729.2-201ENST00000416137 156 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AL356535.1-201ENST00000440335 398 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 SSXP4-201ENST00000451349 245 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 SNORA67.7-201ENST00000516664 135 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 RNU7-110P-201ENST00000516891 62 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AC027288.2-201ENST00000553028 243 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 MIR3158-1-201ENST00000583596 81 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AC005296.1-201ENST00000616145 209 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 AC006133.1-201ENST00000617106 264 ntBASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.36□□□□□ -1.71
ZKSCAN3Q9BRR0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms