Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-1025P-201ENST00000410629 104 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC063976.4-201ENST00000421971 163 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC002429.1-201ENST00000437672 148 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 MTND1P30-201ENST00000441241 901 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 SNRPEP8-201ENST00000442866 260 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 snoU13.14-201ENST00000459372 104 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC010468.3-201ENST00000508225 458 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 RNU6-150P-201ENST00000516237 95 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC092325.1-201ENST00000566449 554 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC104072.1-201ENST00000568817 668 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL391001.1-201ENST00000602747 715 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL358072.1-201ENST00000604156 575 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC107304.1-201ENST00000604229 296 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL445435.1-201ENST00000604232 665 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC025811.1-201ENST00000604312 472 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC007363.1-201ENST00000604736 620 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AL355816.2-201ENST00000610049 647 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
VPS25Q9BRG1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
VPS25Q9BRG1 RNU6-862P-201ENST00000362804 105 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 RNU6-1122P-201ENST00000384449 107 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL358794.1-201ENST00000445689 381 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL513124.1-201ENST00000450410 614 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 RPL18AP17-201ENST00000455326 198 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL583843.1-201ENST00000456070 346 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AC048334.1-201ENST00000477975 159 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 RPL39P36-201ENST00000490784 156 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 ARL2BPP4-201ENST00000506854 471 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 MTCO3P28-201ENST00000513351 515 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 SNORA31.2-201ENST00000516019 134 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 RNU6-143P-201ENST00000516942 93 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AP000873.5-201ENST00000533906 236 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 BNIP3P6-201ENST00000549284 499 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AL442163.3-201ENST00000554110 156 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AC009977.1-201ENST00000586015 570 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 BNIP3P22-201ENST00000593399 556 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 AP000654.2-201ENST00000605633 586 ntBASIC0.34□□□□□ -2.36
VPS25Q9BRG1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
VPS25Q9BRG1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL391994.1-201ENST00000254724 282 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 SNORA18.2-201ENST00000383865 132 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 SNORD116-20-201ENST00000384529 92 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 MIR19A-201ENST00000384878 82 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 MIR634-201ENST00000385208 97 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL357139.1-201ENST00000407792 426 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS25Q9BRG1 SEPT14P24-201ENST00000447236 180 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.33□□□□□ -2.36
VPS25Q9BRG1 SNORA31.16-201ENST00000516773 139 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 SUMO2P18-201ENST00000518873 252 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL121579.1-201ENST00000555129 305 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.33□□□□□ -2.36
VPS25Q9BRG1 MIR3973-201ENST00000579824 107 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC068620.3-201ENST00000602749 560 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AC069114.2-201ENST00000604699 304 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 AL391813.2-201ENST00000609113 322 ntBASIC0.33□□□□□ -2.36
VPS25Q9BRG1 RNU6-777P-201ENST00000364265 104 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 SNORA63D-201ENST00000364359 132 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 RNU6-487P-201ENST00000365430 104 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 Y_RNA.500-201ENST00000384466 111 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 CYCSP33-201ENST00000414485 327 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC004941.2-201ENST00000427009 228 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 MTCO1P3-201ENST00000429327 192 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AL008629.1-201ENST00000438615 184 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 CALM1P1-201ENST00000442082 433 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 NEFMP1-201ENST00000443423 1006 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 FTH1P25-201ENST00000447665 469 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 snoU13.27-201ENST00000459278 104 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC025423.5-201ENST00000550230 219 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 RPL21P136-201ENST00000605378 396 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC016911.1-201ENST00000613297 452 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.32□□□□□ -2.36
VPS25Q9BRG1 AC106858.1-201ENST00000637497 429 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms