Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPS29P27-201ENST00000463711 170 ntBASIC3.31□□□□□ -1.88
SMOQ99835 RPL23AP14-201ENST00000468281 468 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
SMOQ99835 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
SMOQ99835 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
SMOQ99835 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.31□□□□□ -1.88
SMOQ99835 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AP004607.1-201ENST00000524456 203 ntBASIC3.31□□□□□ -1.88
SMOQ99835 SUB1P3-201ENST00000564581 315 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.31□□□□□ -1.88
SMOQ99835 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.31□□□□□ -1.88
SMOQ99835 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC020895.1-201ENST00000595362 272 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.31□□□□□ -1.88
SMOQ99835 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
SMOQ99835 MIR8076-201ENST00000611401 83 ntBASIC3.31□□□□□ -1.88
SMOQ99835 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
SMOQ99835 MIR6134-201ENST00000617606 109 ntBASIC3.31□□□□□ -1.88
SMOQ99835 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
SMOQ99835 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.31□□□□□ -1.88
SMOQ99835 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SMOQ99835 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
SMOQ99835 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMOQ99835 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMOQ99835 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
SMOQ99835 RNU6-105P-201ENST00000363909 104 ntBASIC3.3□□□□□ -1.88
SMOQ99835 Y_RNA.364-201ENST00000365532 101 ntBASIC3.3□□□□□ -1.88
SMOQ99835 Y_RNA.428-201ENST00000384078 102 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AL591034.2-201ENST00000402839 359 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.3□□□□□ -1.88
SMOQ99835 CYCSP32-201ENST00000440548 321 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.3□□□□□ -1.88
SMOQ99835 snoU13.28-201ENST00000459235 104 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC105758.1-201ENST00000506038 399 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
SMOQ99835 SNORA25.10-201ENST00000515926 124 ntBASIC3.3□□□□□ -1.88
SMOQ99835 SNORD116.3-201ENST00000517176 78 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AL451007.1-201ENST00000595491 289 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC024153.1-201ENST00000603103 365 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC092447.9-201ENST00000603395 144 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AP001836.1-201ENST00000604675 523 ntBASIC3.3□□□□□ -1.88
SMOQ99835 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
SMOQ99835 HMGB1P24-202ENST00000615653 685 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
SMOQ99835 MIR6076-201ENST00000617521 113 ntBASIC3.3□□□□□ -1.88
SMOQ99835 AC073308.1-201ENST00000623696 305 ntBASIC3.3□□□□□ -1.88
SMOQ99835 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMOQ99835 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMOQ99835 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SMOQ99835 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.29□□□□□ -1.88
SMOQ99835 Y_RNA.158-201ENST00000363651 101 ntBASIC3.29□□□□□ -1.88
SMOQ99835 RNU6-99P-201ENST00000364721 107 ntBASIC3.29□□□□□ -1.88
SMOQ99835 RNU1-100P-201ENST00000365255 165 ntBASIC3.29□□□□□ -1.88
SMOQ99835 Y_RNA.459-201ENST00000384251 102 ntBASIC3.29□□□□□ -1.88
SMOQ99835 SNORA54-201ENST00000384281 123 ntBASIC3.29□□□□□ -1.88
SMOQ99835 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
SMOQ99835 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 NUP35P1-201ENST00000422734 947 ntBASIC3.29□□□□□ -1.88
SMOQ99835 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
SMOQ99835 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 RPL26P9-201ENST00000457466 433 ntBASIC3.29□□□□□ -1.88
SMOQ99835 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 RPL17P19-201ENST00000489069 552 ntBASIC3.29□□□□□ -1.88
SMOQ99835 AC008885.1-201ENST00000514930 301 ntBASIC3.29□□□□□ -1.88
SMOQ99835 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
SMOQ99835 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.29□□□□□ -1.88
SMOQ99835 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 AC097372.5-201ENST00000623665 376 ntBASIC3.29□□□□□ -1.88
SMOQ99835 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
SMOQ99835 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMOQ99835 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.29□□□□□ -1.88
SMOQ99835 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMOQ99835 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.29□□□□□ -1.88
SMOQ99835 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMOQ99835 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
SMOQ99835 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMOQ99835 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
SMOQ99835 AL136164.4-201ENST00000625013 2135 ntBASIC3.28□□□□□ -1.88
SMOQ99835 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMOQ99835 SNORD50.1-201ENST00000362987 71 ntBASIC3.28□□□□□ -1.88
SMOQ99835 RNY1P16-201ENST00000363063 111 ntBASIC3.28□□□□□ -1.88
SMOQ99835 Y_RNA.111-201ENST00000363248 100 ntBASIC3.28□□□□□ -1.88
SMOQ99835 AC117470.1-201ENST00000381974 330 ntBASIC3.28□□□□□ -1.88
SMOQ99835 MIR128-1-201ENST00000384921 82 ntBASIC3.28□□□□□ -1.88
SMOQ99835 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SMOQ99835 SNORD67-201ENST00000390833 111 ntBASIC3.28□□□□□ -1.88
SMOQ99835 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.28□□□□□ -1.88
SMOQ99835 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.28□□□□□ -1.88
SMOQ99835 BPY2DP-201ENST00000422208 265 ntBASIC3.28□□□□□ -1.88
SMOQ99835 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
SMOQ99835 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.28□□□□□ -1.88
SMOQ99835 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
SMOQ99835 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.28□□□□□ -1.88
SMOQ99835 SNORA31.18-201ENST00000517043 134 ntBASIC3.28□□□□□ -1.88
SMOQ99835 Y_RNA.720-201ENST00000517166 92 ntBASIC3.28□□□□□ -1.88
SMOQ99835 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms