Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.9□□□□□ -2.11
NPAS2Q99743 RPL38P4-201ENST00000502376 214 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.9□□□□□ -2.11
NPAS2Q99743 AC117532.1-201ENST00000514638 323 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 SCARNA24.1-201ENST00000516465 137 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 Y_RNA.687-201ENST00000516558 91 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 Y_RNA.688-201ENST00000516565 95 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 MIR3913-1-201ENST00000577744 102 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC040904.1-201ENST00000590850 223 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC119751.7-201ENST00000600494 245 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC010620.1-201ENST00000601088 1102 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.9□□□□□ -2.11
NPAS2Q99743 AC005034.5-201ENST00000604219 466 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AC090578.1-201ENST00000604955 591 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AP001506.1-201ENST00000615444 211 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 AL157786.1-207ENST00000627771 695 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
NPAS2Q99743 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NPAS2Q99743 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NPAS2Q99743 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
NPAS2Q99743 RNU6-641P-201ENST00000384006 107 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.89□□□□□ -2.11
NPAS2Q99743 MTCO2P16-201ENST00000436962 677 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AC244505.5-201ENST00000443639 207 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 USP9YP29-201ENST00000445112 563 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.89□□□□□ -2.11
NPAS2Q99743 MTCYBP1-201ENST00000454315 1119 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.89□□□□□ -2.11
NPAS2Q99743 Vault.3-201ENST00000516676 95 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 RN7SKP256-201ENST00000517201 314 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.89□□□□□ -2.11
NPAS2Q99743 AL356057.1-201ENST00000533798 831 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AP000763.2-201ENST00000540641 163 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AC064872.1-201ENST00000604823 1072 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 AL121992.2-201ENST00000606262 256 ntBASIC1.89□□□□□ -2.11
NPAS2Q99743 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.89□□□□□ -2.11
NPAS2Q99743 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
NPAS2Q99743 FARSBP1-201ENST00000435808 1778 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AL356292.1-201ENST00000283110 373 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 RNA5SP99-201ENST00000364020 114 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 RNU4-91P-201ENST00000364778 135 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 CBX3P9-201ENST00000402326 552 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 RAP1BP3-201ENST00000407180 549 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.88□□□□□ -2.11
NPAS2Q99743 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NPAS2Q99743 EEF1A1P40-201ENST00000412883 573 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.88□□□□□ -2.11
NPAS2Q99743 MTCYBP5-201ENST00000423752 1135 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC073614.1-201ENST00000438690 650 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AL360271.2-201ENST00000447710 161 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC104058.1-201ENST00000448028 297 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.88□□□□□ -2.11
NPAS2Q99743 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC006512.1-201ENST00000468816 291 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.88□□□□□ -2.11
NPAS2Q99743 SNORA43.2-201ENST00000516652 128 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 RNU6-667P-201ENST00000517186 102 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.88□□□□□ -2.11
NPAS2Q99743 AP005136.1-201ENST00000579765 429 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC008521.1-201ENST00000587471 187 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 MIR98-201ENST00000606724 119 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 AC093648.1-201ENST00000623546 606 ntBASIC1.88□□□□□ -2.11
NPAS2Q99743 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NPAS2Q99743 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NPAS2Q99743 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPAS2Q99743 RNY1P12-201ENST00000364251 105 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 RNU6-61P-201ENST00000365528 109 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 SNORD116-2-201ENST00000384274 95 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 RNU6-611P-201ENST00000384276 104 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 RNU6-348P-201ENST00000384386 107 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 SNORD116-6-201ENST00000384711 96 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC074117.2-201ENST00000417130 397 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 C1DP2-201ENST00000418167 426 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 USP9YP18-201ENST00000425912 695 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 MTND2P29-201ENST00000438595 412 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 MTCO1P19-201ENST00000443487 500 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 MTND1P27-201ENST00000451117 902 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.87□□□□□ -2.11
NPAS2Q99743 PMCHL2-203ENST00000457791 237 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 RNU6-956P-201ENST00000458868 103 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.87□□□□□ -2.11
NPAS2Q99743 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.87□□□□□ -2.11
NPAS2Q99743 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms