Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AL353778.1-201ENST00000603149 408 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AL353997.5-201ENST00000618886 171 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 ZNF29P-201ENST00000225587 168 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 CBX3P1-201ENST00000325243 554 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 RNU6-660P-201ENST00000364566 109 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
VAT1Q99536 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 BTF3L4P1-201ENST00000413813 468 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AC118469.1-201ENST00000442943 488 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.31□□□□□ -2.2
VAT1Q99536 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.31□□□□□ -2.2
VAT1Q99536 RN7SKP210-201ENST00000459176 261 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AP000797.1-201ENST00000478870 387 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AC009646.1-201ENST00000510455 318 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.31□□□□□ -2.2
VAT1Q99536 RNU6-991P-201ENST00000516168 107 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.31□□□□□ -2.2
VAT1Q99536 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.31□□□□□ -2.2
VAT1Q99536 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.31□□□□□ -2.2
VAT1Q99536 AC105148.1-201ENST00000604961 409 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AC012409.4-201ENST00000612923 249 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 AL445984.1-201ENST00000637834 659 ntBASIC1.31□□□□□ -2.2
VAT1Q99536 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VAT1Q99536 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
VAT1Q99536 RNU6-439P-201ENST00000384188 106 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 RNU4-62P-201ENST00000410125 130 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 CBX3P6-201ENST00000430257 527 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 HMGB1P31-201ENST00000437242 427 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.3□□□□□ -2.2
VAT1Q99536 AL035666.1-201ENST00000446195 348 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC006026.2-201ENST00000457376 180 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.3□□□□□ -2.2
VAT1Q99536 AC114801.2-201ENST00000503825 781 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 MTCO3P9-201ENST00000506989 781 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.3□□□□□ -2.2
VAT1Q99536 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
VAT1Q99536 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
VAT1Q99536 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.3□□□□□ -2.2
VAT1Q99536 AC137800.2-201ENST00000574375 120 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC025754.2-201ENST00000606491 432 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AC092106.3-201ENST00000611308 722 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 AL031667.3-201ENST00000620124 655 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 RMST_7.1-201ENST00000621935 268 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
VAT1Q99536 AC006927.4-201ENST00000639187 543 ntBASIC1.3□□□□□ -2.2
VAT1Q99536 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
VAT1Q99536 RNA5SP493-201ENST00000364115 91 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 RPS27AP14-201ENST00000422868 454 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 MTCO3P46-201ENST00000425787 232 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.29□□□□□ -2.2
VAT1Q99536 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 MTND5P2-201ENST00000442927 1142 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AL360271.2-201ENST00000447710 161 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.29□□□□□ -2.2
VAT1Q99536 AC108078.2-201ENST00000510750 236 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.29□□□□□ -2.2
VAT1Q99536 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.29□□□□□ -2.2
VAT1Q99536 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.29□□□□□ -2.2
VAT1Q99536 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AP000720.1-201ENST00000625091 483 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
VAT1Q99536 AL161722.3-201ENST00000605789 2983 ntBASIC1.29□□□□□ -2.2
VAT1Q99536 AP000560.1-201ENST00000624150 1937 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VAT1Q99536 Y_RNA.18-201ENST00000362461 102 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU6-23P-201ENST00000363283 107 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU4-1-201ENST00000363925 141 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU6-371P-201ENST00000364283 108 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VAT1Q99536 RNU6-1200P-201ENST00000384162 107 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU6-39P-201ENST00000384344 107 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU6-1176P-201ENST00000390955 107 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 SNORD115.1-201ENST00000391109 76 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 RPL39P29-201ENST00000447779 157 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AL009048.1-201ENST00000450437 298 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AC009474.2-201ENST00000451383 136 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 AL122001.1-201ENST00000457027 370 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU1-86P-201ENST00000516108 154 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 RNU1-107P-201ENST00000516617 154 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 MTND4LP18-201ENST00000526864 291 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 DNAJC19P9-201ENST00000555084 351 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 MIR3169-201ENST00000578032 83 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms