Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC124312.4-201ENST00000605533 310 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MKKS-204ENST00000639674 192 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-509P-201ENST00000363519 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNA5SP325-201ENST00000363756 130 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-1179P-201ENST00000384667 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORA40.4-201ENST00000390971 128 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC007283.2-201ENST00000424739 197 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL392003.1-201ENST00000434394 243 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORD127-201ENST00000458892 86 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNA5SP57-201ENST00000459463 123 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 HAR1A.1-201ENST00000459583 118 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RPL23AP71-201ENST00000470966 469 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC096751.1-202ENST00000502691 1067 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-496P-201ENST00000516145 99 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU2-53P-201ENST00000516257 147 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-720P-201ENST00000516363 108 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 TRAV37-201ENST00000553906 342 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL391834.2-201ENST00000609982 546 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC006160.2-201ENST00000637708 154 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-315P-201ENST00000362666 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RN7SKP185-201ENST00000362813 326 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-457P-201ENST00000363999 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-1082P-201ENST00000364574 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU4-11P-201ENST00000365287 132 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 FGF7P8-201ENST00000402994 292 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL138878.1-201ENST00000405131 347 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-1245P-201ENST00000411130 106 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 BTF3P8-201ENST00000414577 526 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL133217.1-201ENST00000450980 425 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU7-119P-201ENST00000459279 63 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC108860.1-201ENST00000484521 383 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 ANXA2P1-201ENST00000505539 926 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC004062.1-201ENST00000509926 645 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC022616.3-201ENST00000523940 148 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.54-201ENST00000362766 105 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.387-201ENST00000383918 102 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 SNORA44-201ENST00000384584 132 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MIR656-201ENST00000385224 78 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU2-71P-201ENST00000411395 189 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PRELID3BP11-201ENST00000414230 479 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC133473.1-201ENST00000455173 299 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-893P-201ENST00000458841 100 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC023141.12-201ENST00000512399 199 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RNU6-687P-201ENST00000516443 89 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AP005660.1-201ENST00000522972 293 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 YPEL5P3-201ENST00000547227 352 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 MIR5186-201ENST00000577504 120 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC078899.3-201ENST00000599065 212 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 AC104695.3-201ENST00000604052 296 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC1.18□□□□□ -2.22
HMCN1Q96RW7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HMCN1Q96RW7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms