Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.72□□□□□ -2.52
VPS13AQ96RL7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.72□□□□□ -2.52
VPS13AQ96RL7 SNORD54-201ENST00000459159 67 ntBASIC-0.72□□□□□ -2.52
VPS13AQ96RL7 NAMPTP3-201ENST00000569273 224 ntBASIC-0.72□□□□□ -2.52
VPS13AQ96RL7 MTCYBP22-201ENST00000603788 447 ntBASIC-0.72□□□□□ -2.52
VPS13AQ96RL7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.72□□□□□ -2.53
VPS13AQ96RL7 ZNF705CP-201ENST00000530515 889 ntBASIC-0.72□□□□□ -2.53
VPS13AQ96RL7 OR6C73P-201ENST00000546432 358 ntBASIC-0.72□□□□□ -2.53
VPS13AQ96RL7 AC079395.3-201ENST00000615161 484 ntBASIC-0.72□□□□□ -2.53
VPS13AQ96RL7 SNORD99-201ENST00000408612 74 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AC010683.1-201ENST00000473673 378 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 SUMO2P16-201ENST00000519475 264 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AP002004.2-201ENST00000531656 154 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 RPS27P16-201ENST00000425758 201 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AC132479.1-201ENST00000449160 144 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 MIR3126-201ENST00000577443 74 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AL391001.1-201ENST00000602747 715 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 RNU6-339P-201ENST00000384310 107 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 MIR496-201ENST00000385226 102 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 MIR196A1-201ENST00000388006 70 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 MED13P1-201ENST00000428342 171 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 AC010809.3-201ENST00000621310 641 ntBASIC-0.73□□□□□ -2.53
VPS13AQ96RL7 RNU6-815P-201ENST00000384080 113 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 SEPT7P5-201ENST00000434048 306 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MIR4436A-201ENST00000585278 85 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MIR8076-201ENST00000611401 83 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AC078938.1-201ENST00000620993 318 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MTND5P17-201ENST00000418405 1603 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MIR153-1-201ENST00000384914 90 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 MIR548L-201ENST00000408303 86 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 USP12-203ENST00000620323 349 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 AL078595.3-201ENST00000623815 1166 ntBASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.74□□□□□ -2.53
VPS13AQ96RL7 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 MIR140-201ENST00000385282 100 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC107297.1-201ENST00000459991 176 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RNU6-863P-201ENST00000515989 104 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RPL23AP91-201ENST00000569211 455 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AL355796.1-201ENST00000406706 323 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC244098.2-201ENST00000422068 99 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RPL7L1P10-201ENST00000427790 463 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 MTND2P2-201ENST00000434633 945 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 MTND4P32-201ENST00000437189 1237 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC091885.1-201ENST00000506658 268 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 SNORA27.4-201ENST00000516650 95 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 SNORA31.22-201ENST00000517204 135 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC109635.4-202ENST00000531666 412 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC024405.2-202ENST00000532731 184 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RNU2-36P-201ENST00000410361 191 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RNU6-1073P-201ENST00000517182 106 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 AL031176.1-201ENST00000604554 466 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 7SK.10-201ENST00000621414 298 ntBASIC-0.75□□□□□ -2.53
VPS13AQ96RL7 RNY3P14-201ENST00000384309 102 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AP003716.2-201ENST00000528260 108 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AC007151.1-201ENST00000572774 483 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AC105129.3-201ENST00000605455 485 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 MIR7844-201ENST00000616161 122 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AC024940.5-201ENST00000622889 474 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 ENSAP3-201ENST00000312710 333 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 SUGT1P1-201ENST00000379514 476 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AL356320.2-201ENST00000417263 507 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 Z82190.1-201ENST00000454534 490 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 AC091965.5-201ENST00000624785 342 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 MIR3529-201ENST00000637713 78 ntBASIC-0.76□□□□□ -2.53
VPS13AQ96RL7 RN7SKP88-201ENST00000516847 250 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 AC112693.2-201ENST00000556538 232 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 7SK.8-201ENST00000612110 250 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 7SK.11-201ENST00000615477 250 ntBASIC-0.77□□□□□ -2.53
VPS13AQ96RL7 UCA1.1-201ENST00000620952 75 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms