Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTCHD1Q96NR3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RNA5SP361-201ENST00000362686 118 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RNU4-90P-201ENST00000362773 141 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RNA5SP399-201ENST00000364003 117 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 SNORD12B-201ENST00000410433 91 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC005002.2-201ENST00000438228 269 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC096638.1-201ENST00000444678 216 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RPL26P9-201ENST00000457466 433 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC084357.1-201ENST00000473404 255 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 RN7SL132P-201ENST00000478131 296 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 PPIAP15-201ENST00000479662 484 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC026402.1-201ENST00000513642 170 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 SERF1AP1-201ENST00000514575 187 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 SNORA31.23-201ENST00000517219 133 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 NACAP3-201ENST00000552100 481 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC027288.2-201ENST00000553028 243 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AL110115.1-201ENST00000614396 364 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 U2.14-201ENST00000615943 113 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AL591424.2-201ENST00000617023 128 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 FTX_2.1-201ENST00000618816 94 ntBASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTCHD1Q96NR3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 U8.10-201ENST00000384260 133 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AL139156.1-201ENST00000412785 841 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AL445305.1-201ENST00000432577 575 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 GPM6BP3-201ENST00000442797 145 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 HSPE1P25-201ENST00000455484 251 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AL136097.1-201ENST00000456945 913 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 RPS4XP22-201ENST00000480755 780 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 RNU6-581P-201ENST00000516214 105 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AC026470.2-201ENST00000561492 181 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 MIR5571-201ENST00000577998 113 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 MIR4644-201ENST00000579929 84 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AC004792.1-201ENST00000614523 137 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AC005296.1-201ENST00000616145 209 ntBASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.72□□□□□ -1.81
PTCHD1Q96NR3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.81
PTCHD1Q96NR3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PTCHD1Q96NR3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC093908.1-201ENST00000623125 8092 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RNU6-270P-201ENST00000364131 105 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 MIR10B-201ENST00000385011 110 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AL033519.2-201ENST00000403958 392 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC099548.1-201ENST00000421443 426 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 WARS2P1-201ENST00000429678 537 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 HMGN2P10-201ENST00000448085 265 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AL138752.1-201ENST00000452964 351 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 MED28P2-201ENST00000475771 317 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC016632.1-201ENST00000503994 196 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RN7SKP49-201ENST00000516675 260 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC009163.5-201ENST00000575421 637 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 MIR5695-201ENST00000579717 85 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AC007656.2-201ENST00000624902 4547 ntBASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.71□□□□□ -1.82
PTCHD1Q96NR3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD1Q96NR3 MAPK10-253ENST00000641010 4072 ntBASIC3.7□□□□□ -1.82
PTCHD1Q96NR3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD1Q96NR3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTCHD1Q96NR3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms