Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 MIR411-201ENST00000362239 96 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 RNU6-989P-201ENST00000362756 107 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHFRQ96EP1 RNY1P5-201ENST00000383890 115 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 RNU6-45P-201ENST00000384471 107 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 AL591704.1-201ENST00000432574 275 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AC067942.3-201ENST00000512025 362 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 RNU6-861P-201ENST00000516745 106 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 RNU6-579P-201ENST00000516879 102 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AC144568.1-201ENST00000520139 137 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 ERHP1-201ENST00000523006 310 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 AC004584.2-201ENST00000570407 410 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 SNHG22-203ENST00000617833 660 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AL360181.4-201ENST00000621752 134 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 AP003355.3-201ENST00000623465 114 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.57□□□□□ -1.84
CHFRQ96EP1 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
CHFRQ96EP1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHFRQ96EP1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 Y_RNA.122-201ENST00000363331 96 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 Y_RNA.199-201ENST00000364014 102 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 SNORD115-46-201ENST00000390982 71 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 AL030996.1-201ENST00000411430 235 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 RN7SL504P-201ENST00000494496 287 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AC010265.1-201ENST00000513509 211 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 RNU6-1278P-201ENST00000516130 107 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 RNU6-911P-201ENST00000516523 104 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 Y_RNA.713-201ENST00000517013 96 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 AC136932.1-201ENST00000574771 208 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 AL365265.1-201ENST00000621045 234 ntBASIC3.56□□□□□ -1.84
CHFRQ96EP1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHFRQ96EP1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
CHFRQ96EP1 AL137003.2-201ENST00000606924 2538 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHFRQ96EP1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU1-76P-201ENST00000362903 159 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 Y_RNA.76-201ENST00000362931 109 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNA5SP374-201ENST00000362939 125 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU6-1290P-201ENST00000362957 109 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 SNORD50.2-201ENST00000365465 70 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 Y_RNA.533-201ENST00000384596 114 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 MRPL35P1-201ENST00000404272 572 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 SNORA11.2-201ENST00000408318 127 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RN7SKP111-201ENST00000410349 271 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU2-20P-201ENST00000410425 191 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 RPL21P40-201ENST00000428586 483 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 DAP3P1-201ENST00000441522 278 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC010631.1-201ENST00000474150 156 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RPS23P5-201ENST00000495419 428 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU7-200P-201ENST00000516105 62 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC024405.2-202ENST00000532731 184 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 MIR5701-3-201ENST00000578890 82 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 MIR4273-201ENST00000582824 84 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 MIR5701-1-201ENST00000585138 82 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AL133393.1-201ENST00000603277 287 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 RNU6-85P-201ENST00000605989 107 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AL591516.1-201ENST00000611326 274 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHFRQ96EP1 MIR5701-2-201ENST00000615634 82 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms