Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RPL23AP49-201ENST00000492925 468 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 RNU1-40P-201ENST00000516816 164 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 RNU1-97P-201ENST00000516872 164 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 SNORA48.11-201ENST00000517015 89 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AP003392.2-201ENST00000527269 208 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AL512310.1-201ENST00000548639 172 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC073410.2-201ENST00000603240 332 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AL713866.2-201ENST00000603579 219 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC007621.1-201ENST00000604544 437 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC005000.2-201ENST00000605468 310 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 AC087241.4-201ENST00000612441 480 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 MIR5739-201ENST00000619803 80 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 MTND4P14-201ENST00000435799 1354 ntBASIC1.79□□□□□ -2.12
RPUSD4Q96CM3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 RNU6-623P-201ENST00000363143 105 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 RNU6-82P-201ENST00000363970 107 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP138-201ENST00000365098 114 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 MIR186-201ENST00000384988 86 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AL606489.2-201ENST00000433886 234 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC107401.1-201ENST00000503426 685 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC026436.1-201ENST00000510537 270 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC090115.3-201ENST00000553218 849 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC004223.2-201ENST00000590309 544 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AL138963.2-201ENST00000605137 226 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC093783.1-201ENST00000612976 329 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 uc_338.15-201ENST00000615470 191 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 AC139792.3-201ENST00000623525 224 ntBASIC1.78□□□□□ -2.12
RPUSD4Q96CM3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC062016.1-201ENST00000355719 319 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RNU6-105P-201ENST00000363909 104 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 SNORA16B-201ENST00000364674 135 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MIR518C-201ENST00000384822 101 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MTCO3P40-201ENST00000392516 676 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RPS29P13-201ENST00000402041 169 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AL133475.1-201ENST00000404414 305 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MTCYBP8-201ENST00000422855 651 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RPS15AP28-201ENST00000435088 386 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AL161788.1-201ENST00000441805 169 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP233-201ENST00000459153 113 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RPL9P6-201ENST00000492764 598 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC091885.1-201ENST00000506658 268 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 RNU6-835P-201ENST00000516974 104 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 CYCSP27-201ENST00000527643 293 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC021269.2-201ENST00000532318 330 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 OR11H5P-201ENST00000554039 926 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MIR3200-201ENST00000580767 85 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC103987.3-201ENST00000582071 292 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 MIR6817-201ENST00000615588 66 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 uc_338.34-201ENST00000617467 174 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AL354950.2-201ENST00000617939 290 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 AC068792.1-201ENST00000621354 417 ntBASIC1.77□□□□□ -2.13
RPUSD4Q96CM3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP68-201ENST00000363885 119 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNU6-266P-201ENST00000364225 107 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 CBX3P9-201ENST00000402326 552 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNU6-648P-201ENST00000410190 107 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNA5SP338-201ENST00000410495 85 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 RNU2-63P-201ENST00000410792 194 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL030996.1-201ENST00000411430 235 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL117339.3-201ENST00000418733 162 ntBASIC1.76□□□□□ -2.13
RPUSD4Q96CM3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms