Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNU6-293P-201ENST00000411259 106 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 Z85995.1-201ENST00000415547 335 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AC008267.5-201ENST00000424928 265 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 USMG5P1-201ENST00000425964 177 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 HMGB1P9-201ENST00000429856 646 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 SETP5-201ENST00000437270 562 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AC011816.1-201ENST00000441346 546 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 RNU7-187P-201ENST00000458985 68 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 SNRPGP3-201ENST00000469405 227 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AC010285.1-201ENST00000470580 392 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 AC023442.1-201ENST00000531247 422 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 MED28P6-201ENST00000558776 231 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 MIR3921-201ENST00000577308 85 ntBASIC2.83□□□□□ -1.96
LMO3Q8TAP4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
LMO3Q8TAP4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 OR4G2P-202ENST00000641004 1759 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RNU6-1059P-201ENST00000363752 98 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RNU1-115P-201ENST00000365329 160 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RNU6-574P-201ENST00000384265 107 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 FABP5P15-201ENST00000453566 214 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC133134.1-201ENST00000466800 359 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RPS23P3-201ENST00000470993 430 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AL049874.1-201ENST00000489560 388 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 MTCO2P24-201ENST00000515611 426 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RNU6-120P-201ENST00000516077 103 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 SNORA31.8-201ENST00000516327 108 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 SCARNA16.2-201ENST00000516520 172 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 RNU6-143P-201ENST00000516942 93 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 COX6CP5-201ENST00000527162 228 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC104695.3-201ENST00000604052 296 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 NUTF2P8-201ENST00000604593 363 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC107294.1-201ENST00000609524 467 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC090132.2-201ENST00000615881 347 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AL162373.1-201ENST00000620433 407 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.82□□□□□ -1.96
LMO3Q8TAP4 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
LMO3Q8TAP4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RNU1-100P-201ENST00000365255 165 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RNU6-196P-201ENST00000384315 107 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 Y_RNA.645-201ENST00000391229 102 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 SNORA48.8-201ENST00000391324 134 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC096664.2-201ENST00000411843 406 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 HMGB3P2-201ENST00000411913 584 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 MTCYBP9-201ENST00000431021 303 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 MYL8P-204ENST00000431574 518 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AP000873.1-201ENST00000463987 400 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RPS20P22-201ENST00000473700 357 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC011005.2-201ENST00000487324 359 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC022493.2-201ENST00000506122 481 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RNU6-764P-201ENST00000516396 105 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC084851.1-201ENST00000529105 249 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 GTF3AP2-201ENST00000557014 266 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 CPDP1-201ENST00000579660 283 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC005899.2-201ENST00000584353 90 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 OR1M4P-201ENST00000589199 287 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 BNIP3P16-201ENST00000589779 534 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC006157.1-201ENST00000611750 366 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 AC087588.2-201ENST00000617667 426 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 MTND5P7-201ENST00000413558 1798 ntBASIC2.81□□□□□ -1.96
LMO3Q8TAP4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMO3Q8TAP4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LMO3Q8TAP4 FAM35BP-202ENST00000497389 3337 ntBASIC2.8□□□□□ -1.96
LMO3Q8TAP4 AF127577.6-201ENST00000623352 2191 ntBASIC2.8□□□□□ -1.96
LMO3Q8TAP4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms