Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU5B-1-201ENST00000363286 116 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-160P-201ENST00000384591 107 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC004941.2-201ENST00000427009 228 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC134050.1-201ENST00000495088 933 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.25□□□□□ -2.37
SYNE1Q8NF91 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.25□□□□□ -2.37
SYNE1Q8NF91 RNU6-1164P-201ENST00000364428 107 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-343P-201ENST00000364709 104 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 SNORD26-201ENST00000384147 75 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNA5SP266-201ENST00000410273 108 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU2-48P-201ENST00000410694 191 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 BX664727.1-201ENST00000416024 466 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RPL30P13-201ENST00000418873 348 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MRPL35P3-201ENST00000421557 364 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 FABP5P15-201ENST00000453566 214 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC023194.1-201ENST00000493084 308 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC096745.1-201ENST00000509945 370 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 SMURF2P1-201ENST00000514992 481 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC112206.4-201ENST00000515142 405 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-583P-201ENST00000516012 92 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 EIF4A1P12-201ENST00000551910 141 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC019288.1-201ENST00000557918 224 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC093249.1-201ENST00000567049 203 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC068620.3-201ENST00000602749 560 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC211469.2-201ENST00000605461 205 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC007490.1-201ENST00000624321 703 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-289P-201ENST00000364093 107 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-353P-201ENST00000364266 108 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RPL7P55-201ENST00000450522 746 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC099513.1-201ENST00000490423 301 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-758P-201ENST00000516292 89 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC087045.1-201ENST00000605856 382 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-1274P-201ENST00000384557 107 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MIR676-201ENST00000390702 67 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 SNORA48.1-201ENST00000390879 135 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC010153.1-201ENST00000432862 727 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 HMGB1P30-201ENST00000492455 606 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC090079.2-201ENST00000575289 768 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 PRR13P7-201ENST00000605538 430 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC009229.3-201ENST00000608056 282 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC004908.3-201ENST00000610248 625 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-212P-201ENST00000362642 104 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 SNORA40C-201ENST00000391285 128 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC024995.1-201ENST00000523014 93 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MIR1322-201ENST00000638013 71 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-960P-201ENST00000364056 120 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 FTH1P15-201ENST00000406984 280 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AL158053.1-201ENST00000441503 453 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MTND2P30-201ENST00000456663 382 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-390P-201ENST00000516259 103 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC099785.1-201ENST00000605697 437 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 FAM157A-202ENST00000615155 405 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU2-42P-201ENST00000410697 113 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC013262.1-201ENST00000426710 252 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC027119.1-201ENST00000440877 241 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU7-140P-201ENST00000459546 60 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC067942.3-201ENST00000512025 362 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-914P-201ENST00000516749 109 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AL356432.3-201ENST00000568952 465 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MTATP6P25-201ENST00000574491 261 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MIR5087-201ENST00000635826 76 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 RNU6-1207P-201ENST00000384343 107 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.572-201ENST00000384757 98 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC010631.1-201ENST00000474150 156 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 AC016925.2-201ENST00000605108 242 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 MIR6857-201ENST00000613267 93 ntBASIC0.24□□□□□ -2.37
SYNE1Q8NF91 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
SYNE1Q8NF91 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MIR16-2-201ENST00000362117 81 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU6-1010P-201ENST00000362757 107 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MIR19B1-201ENST00000384829 87 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 MTND4LP7-201ENST00000431728 294 ntBASIC0.23□□□□□ -2.37
SYNE1Q8NF91 RNU1-131P-201ENST00000458943 161 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms