Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 AC110491.1-201ENST00000562191 2010 ntBASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PIK3C3Q8NEB9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 ADAM3A-203ENST00000461344 2157 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RNU6-874P-201ENST00000362390 105 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RNU6-1280P-201ENST00000365211 107 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RNU6-213P-201ENST00000384051 104 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 SNORA3.3-201ENST00000408712 125 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RNA5SP44-201ENST00000410446 133 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC074117.2-201ENST00000417130 397 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 BPY2DP-201ENST00000422208 265 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AL358453.1-201ENST00000422522 250 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 CBX3P6-201ENST00000430257 527 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RPS26P21-201ENST00000475397 348 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RPL30P14-201ENST00000482744 348 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 MRPL42P6-201ENST00000486397 371 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC074250.1-201ENST00000511117 192 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 SNORA25.11-201ENST00000515935 105 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 Y_RNA.668-201ENST00000516233 93 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC016256.1-201ENST00000547971 354 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 MTND4LP5-201ENST00000605152 292 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AC107871.2-201ENST00000612894 502 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 MIR8062-201ENST00000621515 85 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 SCARNA4-201ENST00000629045 128 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 AF117829.1-206ENST00000621883 3802 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.41□□□□□ -1.86
PIK3C3Q8NEB9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PIK3C3Q8NEB9 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.86
PIK3C3Q8NEB9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.86
PIK3C3Q8NEB9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PIK3C3Q8NEB9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 Y_RNA.27-201ENST00000362540 103 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RNU1-76P-201ENST00000362903 159 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 SNORA73.2-201ENST00000364946 201 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 Y_RNA.471-201ENST00000384312 102 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 FTH1P15-201ENST00000406984 280 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 CYCSP32-201ENST00000440548 321 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 SSXP4-201ENST00000451349 245 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 snoU13.30-201ENST00000458951 104 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC034236.1-201ENST00000469891 373 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RPS29P20-201ENST00000489592 171 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RN7SL323P-201ENST00000494712 295 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC097462.2-201ENST00000504623 481 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RN7SKP21-201ENST00000516503 220 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 SNORA40.15-201ENST00000516884 107 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC034114.1-201ENST00000520293 285 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC021739.1-201ENST00000559631 174 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 MIR3160-1-201ENST00000577972 85 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 MIR3668-201ENST00000582138 75 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 RAC1P9-201ENST00000604990 392 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 AC110774.1-201ENST00000623567 2018 ntBASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PIK3C3Q8NEB9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PIK3C3Q8NEB9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PIK3C3Q8NEB9 Z75746.1-201ENST00000440243 2080 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms