Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC069200.1-201ENST00000609511 323 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC005562.2-201ENST00000618264 111 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 INTS6P1-201ENST00000504674 2530 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AL590240.1-201ENST00000334118 313 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 U3.9-201ENST00000363823 204 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.329-201ENST00000365209 107 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.415-201ENST00000384012 112 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 MIR147B-201ENST00000390185 80 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-750P-201ENST00000390946 107 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 U3.40-201ENST00000408706 208 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 RPS3P1-201ENST00000456781 192 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AC091179.1-201ENST00000461606 579 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 HMGB3P3-201ENST00000510526 400 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-436P-201ENST00000516171 114 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AP000867.2-201ENST00000532468 320 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AC011471.1-201ENST00000585766 187 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AL391813.1-201ENST00000603098 260 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 AC091979.2-201ENST00000607514 214 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 MIR378J-201ENST00000611988 109 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DEPDC4Q8N2C3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.23-201ENST00000362496 106 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP123-201ENST00000363244 119 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 Y_RNA.272-201ENST00000364696 102 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-1081P-201ENST00000384537 107 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC140479.3-201ENST00000418944 1126 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 RPL23AP70-201ENST00000483361 460 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC068205.3-201ENST00000636385 468 ntBASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.4□□□□□ -1.71
DEPDC4Q8N2C3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC007496.3-201ENST00000624987 3443 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNU4-15P-201ENST00000362613 141 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 Y_RNA.75-201ENST00000362927 97 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNU4-17P-201ENST00000365598 141 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNU2-49P-201ENST00000410666 184 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNU5E-9P-201ENST00000411164 104 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 COX6B1P1-201ENST00000415962 213 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 Y_RNA.637-201ENST00000459424 114 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RN7SL738P-201ENST00000470264 297 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC105137.1-201ENST00000484355 562 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC026241.1-201ENST00000517873 2142 ntBASIC4.39□□□□□ -1.71
DEPDC4Q8N2C3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-1210P-201ENST00000363775 107 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 RNU6-454P-201ENST00000364292 107 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 Y_RNA.238-201ENST00000364441 102 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AL133475.1-201ENST00000404414 305 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 Z74021.1-201ENST00000423610 407 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 TOMM22P2-201ENST00000430735 237 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 AC091390.1-201ENST00000433904 331 ntBASIC4.38□□□□□ -1.71
DEPDC4Q8N2C3 SNORA71B-202ENST00000439232 272 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms