Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 SNORD45.3-201ENST00000363836 72 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 Y_RNA.544-201ENST00000384650 113 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 MIR1263-201ENST00000408324 86 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 RNU7-141P-201ENST00000459304 62 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 RN7SL691P-201ENST00000494487 301 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 CYCSP23-201ENST00000519781 313 ntBASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.59□□□□□ -1.67
NPAS3Q8IXF0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NPAS3Q8IXF0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 MIR372-201ENST00000362225 67 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 SNORD115-8-201ENST00000363856 82 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RN7SKP224-201ENST00000364140 325 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 SNORD115-38-201ENST00000365037 82 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU1-140P-201ENST00000365040 165 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AL359837.1-201ENST00000381357 287 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU6-882P-201ENST00000391025 103 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AL590004.2-201ENST00000404787 371 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNA5SP56-201ENST00000410277 118 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU6-712P-201ENST00000410558 100 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU2-32P-201ENST00000411193 191 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 GPM6BP3-201ENST00000442797 145 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 SNORA84-201ENST00000459229 133 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AC091179.3-201ENST00000474761 144 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNA5SP497-201ENST00000516081 97 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNA5SP281-201ENST00000516504 135 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RNU2-12P-201ENST00000517216 168 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 AL590808.1-201ENST00000618696 141 ntBASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPAS3Q8IXF0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AL672167.1-205ENST00000641112 3080 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNU6-1125P-201ENST00000363601 107 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNU6-72P-201ENST00000384285 79 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNU6-855P-201ENST00000410395 104 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNU4-43P-201ENST00000410628 137 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AC008134.1-201ENST00000420943 193 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AC091390.3-201ENST00000426478 338 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AL078601.1-201ENST00000444542 271 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 FABP5P15-201ENST00000453566 214 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RPL39P34-201ENST00000477141 156 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNA5SP395-201ENST00000516567 118 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RNU6-107P-201ENST00000516643 102 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 MIR92B-201ENST00000607575 96 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 AC034229.5-201ENST00000624258 185 ntBASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS3Q8IXF0 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 RNU6-454P-201ENST00000364292 107 ntBASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 RNU6-1296P-201ENST00000383879 107 ntBASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 RNU6-793P-201ENST00000384233 104 ntBASIC4.56□□□□□ -1.68
NPAS3Q8IXF0 SNORA79-201ENST00000408376 140 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms