Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.54□□□□□ -2
LDB1Q86U70 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
LDB1Q86U70 RNU6-1010P-201ENST00000362757 107 ntBASIC2.54□□□□□ -2
LDB1Q86U70 RNU6-105P-201ENST00000363909 104 ntBASIC2.54□□□□□ -2
LDB1Q86U70 MIR592-201ENST00000384959 97 ntBASIC2.54□□□□□ -2
LDB1Q86U70 RNU6-332P-201ENST00000391193 108 ntBASIC2.54□□□□□ -2
LDB1Q86U70 RNA5SP118-201ENST00000410385 109 ntBASIC2.54□□□□□ -2
LDB1Q86U70 HMGN2P35-201ENST00000412164 270 ntBASIC2.54□□□□□ -2
LDB1Q86U70 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
LDB1Q86U70 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.54□□□□□ -2
LDB1Q86U70 RPL30P4-201ENST00000429309 333 ntBASIC2.54□□□□□ -2
LDB1Q86U70 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.54□□□□□ -2
LDB1Q86U70 AL031274.1-201ENST00000450334 232 ntBASIC2.54□□□□□ -2
LDB1Q86U70 AC013470.1-201ENST00000453438 462 ntBASIC2.54□□□□□ -2
LDB1Q86U70 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
LDB1Q86U70 AC080013.2-201ENST00000460866 323 ntBASIC2.54□□□□□ -2
LDB1Q86U70 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
LDB1Q86U70 HMGN2P26-201ENST00000463169 339 ntBASIC2.54□□□□□ -2
LDB1Q86U70 SNORA25.11-201ENST00000515935 105 ntBASIC2.54□□□□□ -2
LDB1Q86U70 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.54□□□□□ -2
LDB1Q86U70 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
LDB1Q86U70 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
LDB1Q86U70 AL121757.2-201ENST00000611223 313 ntBASIC2.54□□□□□ -2
LDB1Q86U70 AC007014.2-201ENST00000615581 479 ntBASIC2.54□□□□□ -2
LDB1Q86U70 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.54□□□□□ -2
LDB1Q86U70 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LDB1Q86U70 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2
LDB1Q86U70 Y_RNA.111-201ENST00000363248 100 ntBASIC2.53□□□□□ -2
LDB1Q86U70 U3.12-201ENST00000364498 214 ntBASIC2.53□□□□□ -2
LDB1Q86U70 Y_RNA.373-201ENST00000365600 103 ntBASIC2.53□□□□□ -2
LDB1Q86U70 Y_RNA.615-201ENST00000410769 117 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.53□□□□□ -2
LDB1Q86U70 AL117339.3-201ENST00000418733 162 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC124916.1-201ENST00000444020 547 ntBASIC2.53□□□□□ -2
LDB1Q86U70 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.53□□□□□ -2
LDB1Q86U70 EEF1B2P7-201ENST00000451177 676 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AP000852.1-201ENST00000472460 573 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC083904.1-201ENST00000487828 231 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.53□□□□□ -2
LDB1Q86U70 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.53□□□□□ -2
LDB1Q86U70 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
LDB1Q86U70 MTND4LP26-201ENST00000518144 282 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.53□□□□□ -2
LDB1Q86U70 RNU6-323P-201ENST00000521915 107 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.53□□□□□ -2
LDB1Q86U70 AC105245.1-201ENST00000581934 244 ntBASIC2.53□□□□□ -2
LDB1Q86U70 MIR5692C1-201ENST00000585309 91 ntBASIC2.53□□□□□ -2
LDB1Q86U70 BNIP3P25-201ENST00000596023 559 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AL357078.3-201ENST00000607528 618 ntBASIC2.53□□□□□ -2
LDB1Q86U70 AC104458.1-201ENST00000608243 463 ntBASIC2.53□□□□□ -2
LDB1Q86U70 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.53□□□□□ -2
LDB1Q86U70 AC024581.2-201ENST00000619986 252 ntBASIC2.53□□□□□ -2
LDB1Q86U70 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LDB1Q86U70 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LDB1Q86U70 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.52□□□□□ -2.01
LDB1Q86U70 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
LDB1Q86U70 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LDB1Q86U70 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LDB1Q86U70 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RNU6-428P-201ENST00000362942 107 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RNU6-1106P-201ENST00000390845 107 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RNU6-1140P-201ENST00000410517 106 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RNU6-1245P-201ENST00000411130 106 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 ZNF885P-201ENST00000420174 1098 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.52□□□□□ -2.01
LDB1Q86U70 AC007969.2-201ENST00000441891 191 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 RPL7P12-201ENST00000446719 750 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.52□□□□□ -2.01
LDB1Q86U70 RPS29P25-201ENST00000481709 171 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.52□□□□□ -2.01
LDB1Q86U70 SMURF2P1-201ENST00000514992 481 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 Y_RNA.665-201ENST00000516177 98 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AC090136.1-201ENST00000520009 240 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.52□□□□□ -2.01
LDB1Q86U70 AL133241.1-201ENST00000556832 487 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
LDB1Q86U70 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LDB1Q86U70 VN1R107P-201ENST00000601784 209 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AP000907.4-201ENST00000604143 237 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LDB1Q86U70 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
LDB1Q86U70 AC002553.4-201ENST00000616896 331 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AL449363.1-201ENST00000617815 186 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 AC007792.1-201ENST00000623023 402 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.52□□□□□ -2.01
LDB1Q86U70 MIR3662-201ENST00000637030 95 ntBASIC2.52□□□□□ -2.01
LDB1Q86U70 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LDB1Q86U70 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
LDB1Q86U70 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.52□□□□□ -2.01
LDB1Q86U70 MTND4P5-201ENST00000435821 1374 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB1Q86U70 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LDB1Q86U70 RNU6-336P-201ENST00000364891 107 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 RNU6-827P-201ENST00000365553 106 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 RNU1-57P-201ENST00000384491 166 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 Y_RNA.510-201ENST00000384511 114 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LDB1Q86U70 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
LDB1Q86U70 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms