Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNY3P15-201ENST00000516297 97 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 AC034114.1-201ENST00000520293 285 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 AL451007.1-201ENST00000595491 289 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 RPL23AP78-201ENST00000599928 470 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 U6.104-201ENST00000637979 90 ntBASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RUFY4Q6ZNE9 AC110491.1-201ENST00000562191 2010 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 RNU1-76P-201ENST00000362903 159 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-270P-201ENST00000364131 105 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.476-201ENST00000384347 108 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 DBIP2-201ENST00000419076 262 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC099548.1-201ENST00000421443 426 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC243964.1-201ENST00000441814 261 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 DYNLT3P2-201ENST00000442517 295 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 HMGN2P10-201ENST00000448085 265 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 TRBV12-2-201ENST00000489763 344 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC006445.2-201ENST00000510061 472 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 SCARNA4-201ENST00000629045 128 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AP000553.6-201ENST00000641242 118 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AC233981.2-201ENST00000611524 1614 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
RUFY4Q6ZNE9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.405-201ENST00000383979 100 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.451-201ENST00000384200 100 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-611P-201ENST00000384276 104 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 SNORD116-20-201ENST00000384529 92 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.524-201ENST00000384564 100 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.561-201ENST00000384694 100 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 NDUFB4P4-201ENST00000404822 243 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Z92545.1-201ENST00000411782 234 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AL356968.1-201ENST00000416622 474 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AC074117.2-201ENST00000417130 397 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 BPY2DP-201ENST00000422208 265 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 CYCSP4-201ENST00000429682 331 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AL590664.1-201ENST00000448065 339 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 SNORD105B-201ENST00000458770 79 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 snoU13.30-201ENST00000458951 104 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 RPS26P21-201ENST00000475397 348 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-928P-201ENST00000516876 104 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-1271P-201ENST00000517049 105 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 MTND4LP5-201ENST00000605152 292 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AC062037.2-201ENST00000610137 73 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 AC073308.1-201ENST00000623696 305 ntBASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RUFY4Q6ZNE9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 Z75746.1-201ENST00000440243 2080 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 SNORD115-32-201ENST00000364079 82 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 Y_RNA.214-201ENST00000364201 112 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-1280P-201ENST00000365211 107 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-1286P-201ENST00000383871 107 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 RPL21P2-201ENST00000440049 481 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 PCNPP5-201ENST00000452246 481 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 AC008155.2-201ENST00000464337 397 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 RNU6-408P-201ENST00000515910 100 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 RNA5SP309-201ENST00000516670 106 ntBASIC4.03□□□□□ -1.76
RUFY4Q6ZNE9 SNORA40.15-201ENST00000516884 107 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms