Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SNORA36A-201ENST00000384221 132 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNU6-474P-201ENST00000384243 107 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 MIR554-201ENST00000384874 96 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 MIR199A2-201ENST00000385289 110 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RN7SKP202-201ENST00000410439 330 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RN7SKP220-201ENST00000410611 288 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RN7SKP58-201ENST00000411010 305 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 EIF4EP2-201ENST00000422816 654 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AL357552.1-201ENST00000445254 415 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RPL27AP5-201ENST00000469428 449 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC068781.1-201ENST00000488231 618 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNU6-307P-201ENST00000516743 106 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNU6-699P-201ENST00000517081 110 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNU6-264P-201ENST00000517134 104 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC091167.4-201ENST00000605079 184 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AL353621.2-201ENST00000605340 133 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC096772.1-201ENST00000609146 564 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC007792.1-201ENST00000623023 402 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 SNORA43.4-201ENST00000629559 138 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 MTND5P30-201ENST00000452896 1731 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 AC233981.2-201ENST00000611524 1614 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNY1P16-201ENST00000363063 111 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.197-201ENST00000364004 102 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR559-201ENST00000385188 96 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR134-201ENST00000385258 73 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU2-23P-201ENST00000410545 195 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNA5SP344-201ENST00000411081 104 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RPL23AP95-201ENST00000426806 265 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AL591419.1-201ENST00000427423 339 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 GPM6BP3-201ENST00000442797 145 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 CYCSP35-201ENST00000451978 304 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RPL30P1-201ENST00000488676 339 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC104564.1-201ENST00000493028 407 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU1-143P-201ENST00000516296 146 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU1-45P-201ENST00000517191 141 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC023632.4-201ENST00000517783 191 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC026333.2-201ENST00000542164 106 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR5696-201ENST00000578474 85 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR5685-201ENST00000579080 79 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR1254-2-201ENST00000579553 63 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 MIR4719-201ENST00000585233 84 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC012493.2-201ENST00000595083 291 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU6-91P-201ENST00000607774 107 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 U1.23-201ENST00000610293 146 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 RNU1-68P-201ENST00000615382 146 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 U1.39-201ENST00000621562 146 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 Z75746.1-201ENST00000440243 2080 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
TMEM88Q6PEY1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.78□□□□□ -1.97
TMEM88Q6PEY1 ZNF299P-201ENST00000406845 1804 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 RNU6-99P-201ENST00000364721 107 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 SNORA41-201ENST00000384675 132 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 MIR1302-11-201ENST00000408051 138 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 MIR1302-9-201ENST00000408365 138 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 MIR1302-10-201ENST00000408734 138 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 CYCSP19-201ENST00000411715 316 ntBASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.77□□□□□ -1.97
TMEM88Q6PEY1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms