Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC010469.1-201ENST00000463864 576 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-496P-201ENST00000516145 99 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-927P-201ENST00000516199 100 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 RNU1-103P-201ENST00000516502 125 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC022559.1-201ENST00000520905 205 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AL157871.3-201ENST00000557231 293 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 HMGB1P14-201ENST00000557424 591 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC012493.2-201ENST00000595083 291 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC073657.2-201ENST00000605661 303 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNKSR3Q6P9H4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.9□□□□□ -1.78
CNKSR3Q6P9H4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CNKSR3Q6P9H4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-47P-201ENST00000383866 107 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 SNORD17-201ENST00000390930 237 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 SNORA12.2-201ENST00000391040 156 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 U8.21-201ENST00000459536 136 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 RPS29P26-201ENST00000477483 171 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-346P-201ENST00000516288 111 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AC103996.1-201ENST00000555468 102 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 MZT1P2-201ENST00000604387 248 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AC004852.3-201ENST00000614131 326 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 AL672296.1-201ENST00000427780 2158 ntBASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.79
CNKSR3Q6P9H4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 SNORD113-8-201ENST00000363497 74 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-937P-201ENST00000384325 106 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 HLFP1-201ENST00000402375 499 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AL451074.5-201ENST00000415894 435 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AL117339.3-201ENST00000418733 162 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 RPS29P27-201ENST00000463711 170 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AL049874.1-201ENST00000489560 388 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC025755.1-201ENST00000521306 278 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 MRPS36P4-201ENST00000534436 298 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC023824.2-201ENST00000566185 400 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 MIR4298-201ENST00000584380 73 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC004832.4-201ENST00000608952 331 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC015813.4-201ENST00000610469 179 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 AC240442.1-201ENST00000616055 283 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.89□□□□□ -1.79
CNKSR3Q6P9H4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AC007785.2-201ENST00000598627 1916 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RNU1-108P-201ENST00000362556 161 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 MTCYBP2-201ENST00000407745 171 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 MIR1183-201ENST00000408856 89 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RN7SKP51-201ENST00000410781 304 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RN7SKP210-201ENST00000459176 261 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RNU7-87P-201ENST00000459343 62 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RPL23AP45-201ENST00000476406 468 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 RNU6-1012P-201ENST00000516606 109 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AC091144.1-201ENST00000519573 138 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AP000787.2-201ENST00000604432 568 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 Y_RNA.772-201ENST00000606692 102 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 MIR7112-201ENST00000616126 65 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 AP003355.3-201ENST00000623465 114 ntBASIC3.88□□□□□ -1.79
CNKSR3Q6P9H4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms