Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 CYCSP27-201ENST00000527643 293 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 SUB1P2-201ENST00000556401 297 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC026464.5-201ENST00000562497 722 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC008088.1-201ENST00000580993 280 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 MIR4513-201ENST00000581077 86 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC078795.2-201ENST00000602835 1252 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-6P-201ENST00000606623 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC078883.4-201ENST00000623218 367 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 MTND4P1-201ENST00000457501 1466 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 SNORD115-3-201ENST00000363100 82 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-944P-201ENST00000364023 107 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-611P-201ENST00000384276 104 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-301P-201ENST00000384277 107 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-434P-201ENST00000384376 107 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-393P-201ENST00000384475 107 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-606P-201ENST00000384721 111 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 MIR518A2-201ENST00000384966 87 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU2-9P-201ENST00000410194 145 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNA5SP425-201ENST00000410336 112 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 C1DP4-201ENST00000455429 424 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AL122001.1-201ENST00000457027 370 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 MTCO2P6-201ENST00000463134 685 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC098862.1-201ENST00000504991 413 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 ANXA2P1-201ENST00000505539 926 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC008549.1-201ENST00000512900 643 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNU6-377P-201ENST00000515965 102 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 Y_RNA.695-201ENST00000516715 107 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC022616.8-201ENST00000533569 253 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC099842.1-201ENST00000619919 596 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
NIPAL3Q6P499 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
NIPAL3Q6P499 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.1
NIPAL3Q6P499 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
NIPAL3Q6P499 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU6-1222P-201ENST00000384615 107 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AL358934.1-201ENST00000432346 324 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RPS15AP10-201ENST00000432472 382 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 PRPS1P1-201ENST00000445305 876 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 GMFBP1-201ENST00000467831 427 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC117532.1-201ENST00000514638 323 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU6-965P-201ENST00000516721 96 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 RNU6-430P-201ENST00000517078 107 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC115990.1-201ENST00000526957 301 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC007834.2-201ENST00000536310 343 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC023050.3-201ENST00000541142 333 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AL391840.1-201ENST00000571144 367 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC009314.1-201ENST00000603871 304 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC008536.2-201ENST00000607284 349 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 AC022418.1-201ENST00000624118 445 ntBASIC1.9□□□□□ -2.11
NIPAL3Q6P499 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NIPAL3Q6P499 Y_RNA.480-201ENST00000384364 102 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 SNORD70.1-201ENST00000391007 85 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 RNU2-48P-201ENST00000410694 191 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC245102.2-201ENST00000448956 180 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC132479.1-201ENST00000449160 144 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms