Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC011611.1-201ENST00000552179 197 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 IMMP1LP2-201ENST00000552954 492 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC023824.2-201ENST00000566185 400 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 MIR3976-201ENST00000606807 139 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC009233.1-201ENST00000616477 371 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AL449363.1-201ENST00000617815 186 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC007792.1-201ENST00000623023 402 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AP003355.3-201ENST00000623465 114 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC080100.1-201ENST00000624239 5356 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 AC002543.1-201ENST00000299783 1954 ntBASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PPP4R4Q6NUP7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 MIR544A-201ENST00000384855 91 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 MIR7-3-201ENST00000384898 110 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RPL21P3-201ENST00000395517 478 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AP000275.1-201ENST00000411943 390 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC022028.1-201ENST00000412054 408 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC074085.1-201ENST00000413598 418 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC008267.5-201ENST00000424928 265 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RPL23AP95-201ENST00000426806 265 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AL133396.1-201ENST00000432048 687 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RPL30P12-201ENST00000474666 353 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-143P-201ENST00000516296 146 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC243960.4-201ENST00000600532 288 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 U1.23-201ENST00000610293 146 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 RNU1-68P-201ENST00000615382 146 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 U1.39-201ENST00000621562 146 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 AL359757.2-201ENST00000624309 274 ntBASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.22□□□□□ -1.89
PPP4R4Q6NUP7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PPP4R4Q6NUP7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP50-201ENST00000363731 107 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-43P-201ENST00000384302 107 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC003685.2-201ENST00000422795 395 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 MTND3P9-201ENST00000429526 346 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 FTH1P25-201ENST00000447665 469 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC107399.1-201ENST00000451226 265 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 RPL21P10-201ENST00000463521 490 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC116337.1-201ENST00000509680 687 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AP005902.1-201ENST00000521358 186 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 HPRT1P3-201ENST00000539521 576 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 AC016727.1-205ENST00000605437 569 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 MIR6128-201ENST00000615528 109 ntBASIC3.21□□□□□ -1.9
PPP4R4Q6NUP7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 SNORA71.3-201ENST00000362582 128 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 U8.8-201ENST00000365399 135 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 RNU1-109P-201ENST00000383960 147 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1222P-201ENST00000384615 107 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1245P-201ENST00000411130 106 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 DBIP2-201ENST00000419076 262 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC124916.1-201ENST00000444020 547 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 RPL39P29-201ENST00000447779 157 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 SNORD105B-201ENST00000458770 79 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC026782.1-201ENST00000512952 449 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC093027.1-201ENST00000546698 429 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 FGF7P1-201ENST00000582820 288 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 MIR3922-201ENST00000585192 84 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC078795.3-201ENST00000602913 472 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 AC124303.1-201ENST00000605703 360 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 SNORA43.4-201ENST00000629559 138 ntBASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PPP4R4Q6NUP7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms