Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GPM6BP3-201ENST00000442797 145 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 MRPS10P1-201ENST00000448483 130 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 AC125238.1-201ENST00000448842 249 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 RPL23AP3-201ENST00000453844 468 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 SNORA40.9-201ENST00000515895 93 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TTC39BQ5VTQ0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AL136164.4-201ENST00000625013 2135 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 Y_RNA.136-201ENST00000363444 102 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 RNY1P5-201ENST00000383890 115 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 U3.19-201ENST00000390893 196 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AL390729.2-201ENST00000416137 156 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 RNA5SP246-201ENST00000458909 119 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC091021.1-201ENST00000468051 388 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC099522.1-202ENST00000514718 367 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 RNY3P16-201ENST00000516338 101 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC006001.4-201ENST00000622243 395 ntBASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TTC39BQ5VTQ0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 Y_RNA.240-201ENST00000364469 95 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RNU6-923P-201ENST00000364753 107 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RNU6-804P-201ENST00000384286 107 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RPL19P1-201ENST00000411635 428 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL358075.3-201ENST00000426289 226 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 SETP5-201ENST00000437270 562 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RPL37P4-201ENST00000448908 268 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RN7SL585P-201ENST00000470538 280 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RNU7-200P-201ENST00000516105 62 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 SNORA31.23-201ENST00000517219 133 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 MTND5P41-201ENST00000517498 206 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 MRPS18CP4-201ENST00000535821 231 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL078605.1-201ENST00000603529 500 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL713866.2-201ENST00000603579 219 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL138963.2-201ENST00000605137 226 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 AL357075.2-201ENST00000614906 189 ntBASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.36□□□□□ -1.71
TTC39BQ5VTQ0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 SNORD115-8-201ENST00000363856 82 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 SNORD115-38-201ENST00000365037 82 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 Y_RNA.331-201ENST00000365267 102 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 MIR613-201ENST00000385248 95 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 POLR2KP2-201ENST00000438155 177 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 SNORD2.1-201ENST00000458762 69 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 snoU13.6-201ENST00000458785 104 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 AP001324.2-201ENST00000461163 319 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 RPS29P19-201ENST00000479709 171 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 CYCSP29-201ENST00000533731 318 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 MIR492-201ENST00000638676 116 ntBASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TTC39BQ5VTQ0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms