Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RPL12P25-201ENST00000455592 494 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 HMGN1P13-201ENST00000505795 138 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 AC008526.1-201ENST00000509149 338 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 RN7SKP24-201ENST00000515888 284 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 RNU6-559P-201ENST00000516151 98 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 CYCSP27-201ENST00000527643 293 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 HMGB1P14-201ENST00000557424 591 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 MIR3609-201ENST00000582661 80 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 AL133255.1-201ENST00000606374 441 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 AC002064.3-201ENST00000623448 346 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 MTND4LP32-201ENST00000636111 270 ntBASIC3.13□□□□□ -1.91
TTC39AQ5SRH9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.135-201ENST00000363439 95 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 RNU6-384P-201ENST00000364900 104 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.460-201ENST00000384255 102 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 RNU2-68P-201ENST00000410878 191 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 AC074085.1-201ENST00000413598 418 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 AC007677.1-201ENST00000445757 515 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 AL583843.1-201ENST00000456070 346 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 RPL30P5-201ENST00000494923 336 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 RPS27P27-201ENST00000498779 255 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 MTND5P5-201ENST00000503764 376 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TTC39AQ5SRH9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC004944.1-201ENST00000517807 3059 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AL049641.1-201ENST00000441055 1948 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RNU6-562P-201ENST00000362731 107 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RNU6-140P-201ENST00000384566 108 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RNU6-1011P-201ENST00000384668 107 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SNORD73A-201ENST00000386062 65 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RPL37P10-201ENST00000412884 288 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC092047.1-201ENST00000424997 240 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SKA2P1-201ENST00000425592 390 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SNRPEP9-201ENST00000436794 238 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 MTND1P17-201ENST00000448961 204 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 MIR892C-201ENST00000516410 77 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.701-201ENST00000516812 110 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SNORA31.19-201ENST00000517079 126 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC087854.1-201ENST00000519706 414 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC123912.5-201ENST00000605470 343 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 RNU6-85P-201ENST00000605989 107 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 AC243829.7-201ENST00000633081 225 ntBASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TTC39AQ5SRH9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 Y_RNA.259-201ENST00000364619 101 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 MIR27B-201ENST00000385129 97 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 RN7SKP158-201ENST00000410453 326 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AL139396.1-201ENST00000421137 167 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 PGBD4P6-201ENST00000421501 610 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC007560.1-201ENST00000426912 237 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 GSTA11P-201ENST00000452866 669 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 SNORD19B-201ENST00000459623 84 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 HMGB1P30-201ENST00000492455 606 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 RPL39P5-202ENST00000512505 151 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AP005597.4-201ENST00000526762 229 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC007151.1-201ENST00000572774 483 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AC007938.3-201ENST00000604965 623 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.1□□□□□ -1.91
TTC39AQ5SRH9 AL160413.1-201ENST00000622780 310 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms