Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SNORD19.2-201ENST00000516978 73 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.5□□□□□ -1.85
LONRF3Q496Y0 AP005597.4-201ENST00000526762 229 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.5□□□□□ -1.85
LONRF3Q496Y0 CBX3P7-201ENST00000532876 502 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 AC022080.3-201ENST00000544433 482 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 AC100830.2-201ENST00000581636 240 ntBASIC3.5□□□□□ -1.85
LONRF3Q496Y0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.5□□□□□ -1.85
LONRF3Q496Y0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.5□□□□□ -1.85
LONRF3Q496Y0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.5□□□□□ -1.85
LONRF3Q496Y0 RNU6-858P-201ENST00000362436 107 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 Z98749.2-208ENST00000381646 500 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 MIR10A-201ENST00000385043 110 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 MIR34A-201ENST00000385130 110 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 MIR634-201ENST00000385208 97 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 UBA52P6-201ENST00000399822 382 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 RNU4-47P-201ENST00000410876 114 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AF228730.4-201ENST00000421457 183 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 UQCRHP3-201ENST00000451503 251 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC116655.1-201ENST00000508324 901 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC092436.3-201ENST00000511788 257 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC007536.1-201ENST00000533382 349 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 APOOP3-201ENST00000536787 586 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC090616.3-201ENST00000582184 217 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 MIR3117-201ENST00000584034 78 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AL627309.6-201ENST00000606857 840 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 AC084781.2-201ENST00000615568 161 ntBASIC3.49□□□□□ -1.85
LONRF3Q496Y0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LONRF3Q496Y0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 SNORD14B-201ENST00000364533 90 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 RNU6-95P-201ENST00000384697 107 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 RNY4P36-201ENST00000391116 96 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 MTCO2P12-201ENST00000427426 682 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AL445687.1-201ENST00000439946 251 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AC012308.1-201ENST00000451232 178 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 snoU109.2-201ENST00000459316 135 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 S100A11P2-201ENST00000467589 312 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 RNU5F-8P-201ENST00000515941 111 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AC091152.3-201ENST00000604227 325 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AC123912.5-201ENST00000605470 343 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AC011890.2-201ENST00000613393 294 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 MIR6134-201ENST00000617606 109 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 AC010378.1-201ENST00000619270 362 ntBASIC3.48□□□□□ -1.85
LONRF3Q496Y0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LONRF3Q496Y0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC135776.4-201ENST00000624300 1904 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 SNORA7.4-201ENST00000384249 137 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 RNU6-601P-201ENST00000384540 107 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 SNORD73A-201ENST00000386062 65 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 U3.26-201ENST00000391236 204 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 MIR1302-11-201ENST00000408051 138 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 MIR1302-9-201ENST00000408365 138 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 MIR1302-10-201ENST00000408734 138 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AL627311.1-201ENST00000431514 115 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC096745.1-201ENST00000509945 370 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC009812.2-201ENST00000517657 457 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 EIF4BP1-201ENST00000554881 351 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AL391813.1-201ENST00000603098 260 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 ELOCP5-201ENST00000604924 333 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 MIR1302-2-201ENST00000607096 138 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 MIR6128-201ENST00000615528 109 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.47□□□□□ -1.85
LONRF3Q496Y0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.47□□□□□ -1.85
LONRF3Q496Y0 AC010329.5-201ENST00000623497 2174 ntBASIC3.46□□□□□ -1.85
LONRF3Q496Y0 AC093010.3-201ENST00000570269 15214 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 RNU6-1227P-201ENST00000383981 107 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 RNU6-43P-201ENST00000384302 107 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 SNORD67-201ENST00000390833 111 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 PGBD4P6-201ENST00000421501 610 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.46□□□□□ -1.86
LONRF3Q496Y0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 263.4 ms